RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1082072", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1082072 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16319703 16319703 PRJNA1082072_P_NODE_1033_length_338_cov_0.871698_g1026_i0 PRJNA1082072 1033 338 0.871698 2.94633924 Rozella allomycis CSF55 988480 Fungi Fungi 159 1.43e-42   NR EPZ32895.1 988480 g1026 i0 75.5 6.78994082840237 110 27 97.6 0 3 332 686 795 EPZ32895.1 HAD-like domain-containing protein [Rozella allomycis CSF55] diamond 2295 159 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
20143547 20143547 PRJNA1082072_P_NODE_1236_length_311_cov_1.617647_g1229_i0 PRJNA1082072 1236 311 1.617647 5.03088217 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 164 2.52e-49   NR PJF20044.1 1246581 g1229 i0 72.8 0.993569131832797 103 28 99.4 0 309 1 62 164 PJF20044.1 hypothetical protein PSACC_00140 [Paramicrosporidium saccamoebae] diamond 309 164 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;