RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1082072", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1082072 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29435587 29435587 PRJNA1082072_P_NODE_2510_length_246_cov_0.890173_g2503_i0 PRJNA1082072 2510 246 0.890173 2.18982558 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 119 4.95e-31   NR HVT13041.1 2682144 g2503 i0 70.4 3.95121951219512 81 24 98.8 0 2 244 95 175 HVT13041.1 ParB/RepB/Spo0J family partition protein [Fimbriimonadaceae bacterium] diamond 972 119 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
31394846 31394846 PRJNA1082072_P_NODE_2476_length_247_cov_0.885057_g2469_i0 PRJNA1082072 2476 247 0.885057 2.18609079 Fimbriimonas sp. 1936159 Bacteria Bacteria 64.7 4.52e-10   NR HSI72700.1 1936159 g2469 i0 46.3 1.74898785425101 80 43 97.2 0 242 3 89 168 HSI72700.1 hypothetical protein [Fimbriimonas sp.] diamond 432 64.7 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;