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contig_metadata

21 rows where bioproject = "PRJNA1082072", tax_clade = "PVC group" and tax_kingdom = "Pseudomonadati"

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tax_superkingdom 1

tax_kingdom 1

  • Pseudomonadati · 21 ✖

tax_clade 1

  • PVC group · 21 ✖

bioproject 1

  • PRJNA1082072 · 21 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1467757 1467757 PRJNA1082072_P_NODE_2082_length_251_cov_0.865169_g2075_i0 PRJNA1082072 2082 251 0.865169 2.17157419 Gemmataceae bacterium 2052164 Bacteria Bacteria 140 2.37e-36   NR HEY7152357.1 2052164 g2075 i0 88 1.97211155378486 83 10 99.2 0 249 1 146 228 HEY7152357.1 DNA-directed RNA polymerase subunit beta' [Gemmataceae bacterium] diamond 495 140 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
2743897 2743897 PRJNA1082072_P_NODE_1723_length_274_cov_1.457711_g1716_i0 PRJNA1082072 1723 274 1.457711 3.99412814 Thermoguttaceae bacterium 2691551 Bacteria Bacteria 62 9e-9   NR MEN6494220.1 2691551 g1716 i0 52.8 0.788321167883212 72 34 78.8 0 257 42 748 819 MEN6494220.1 efflux RND transporter permease subunit [Thermoguttaceae bacterium] diamond 216 62 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Thermoguttaceae   Thermoguttaceae bacterium
9120803 9120803 PRJNA1082072_P_NODE_2308_length_249_cov_0.875000_g2301_i0 PRJNA1082072 2308 249 0.875 2.17875 Planctomycetota bacterium 2026780 Bacteria Bacteria 105 5.91e-25   NR HZV00243.1 2026780 g2301 i0 64.6 2.97590361445783 82 29 98.8 0 247 2 198 279 HZV00243.1 PDZ domain-containing protein [Planctomycetota bacterium] diamond 741 105 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
11671872 11671872 PRJNA1082072_P_NODE_2350_length_248_cov_0.880000_g2343_i0 PRJNA1082072 2350 248 0.88 2.1824 Planctomycetota bacterium 2026780 Bacteria Bacteria 127 2.9999999999999998e-33   NR HZU99629.1 2026780 g2343 i0 81.5 1.95967741935484 81 15 98 0 1 243 214 294 HZU99629.1 thiolase family protein [Planctomycetota bacterium] diamond 486 127 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
26909349 26909349 PRJNA1082072_P_NODE_2382_length_248_cov_0.880000_g2375_i0 PRJNA1082072 2382 248 0.88 2.1824 Phycisphaerae bacterium 2026778 Bacteria Bacteria 46.2 0.00242   NR MBN2561389.1 2026778 g2375 i0 39.7 2.98790322580645 58 34 69 1 75 245 168 225 MBN2561389.1 protein kinase [Phycisphaerae bacterium] diamond 741 46.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
26909351 26909351 PRJNA1082072_P_NODE_602_length_406_cov_1.849850_g595_i0 PRJNA1082072 602 406 1.84985 7.510391 Planctomycetota bacterium 2026780 Bacteria Bacteria 50.1 6.28e-4   NR MCY2974157.1 2026780 g595 i0 36.1 1.6256157635468 72 46 53.2 0 5 220 274 345 MCY2974157.1 hypothetical protein [Planctomycetota bacterium] diamond 660 50.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28078114 28078114 PRJNA1082072_P_NODE_2365_length_248_cov_0.880000_g2358_i0 PRJNA1082072 2365 248 0.88 2.1824 Planctomycetota bacterium 2026780 Bacteria Bacteria 93.2 7.1e-20   NR MEC8554359.1 2026780 g2358 i0 56.1 3.97983870967742 82 36 99.2 0 1 246 768 849 MEC8554359.1 Ig-like domain-containing protein [Planctomycetota bacterium] diamond 987 93.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28267468 28267468 PRJNA1082072_P_NODE_1246_length_310_cov_1.126582_g1239_i0 PRJNA1082072 1246 310 1.126582 3.4924042 Roseimaritima ulvae 980254 Bacteria Bacteria 53.5 1.4e-5   NR WP_168215727.1 980254 g1239 i0 39.8 2.99032258064516 103 62 99.7 0 1 309 1551 1653 WP_168215727.1 Ig-like domain-containing protein [Roseimaritima ulvae] diamond 927 53.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Roseimaritima Roseimaritima ulvae
28393869 28393869 PRJNA1082072_P_NODE_1806_length_268_cov_1.579487_g1799_i0 PRJNA1082072 1806 268 1.579487 4.23302516 Planctomycetota bacterium 2026780 Bacteria Bacteria 54.3 3.92e-6   NR MCH8165545.1 2026780 g1799 i0 41.5 0.727611940298508 65 37 72.8 1 230 36 149 212 MCH8165545.1 hypothetical protein [Planctomycetota bacterium] diamond 195 54.3 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29120374 29120374 PRJNA1082072_P_NODE_1929_length_260_cov_1.112299_g1922_i0 PRJNA1082072 1929 260 1.112299 2.8919774 Phycisphaerales bacterium 2052180 Bacteria Bacteria 104 2.22e-25   NR MBY0307716.1 2052180 g1922 i0 56.6 0.957692307692308 83 35 94.6 1 5 250 22 104 MBY0307716.1 S10 family peptidase [Phycisphaerales bacterium] diamond 249 104 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
29814687 29814687 PRJNA1082072_P_NODE_2171_length_250_cov_0.870056_g2164_i0 PRJNA1082072 2171 250 0.870056 2.17514 Gemmataceae bacterium 2052164 Bacteria Bacteria 85.9 1.19e-17   NR MFO0965902.1 2052164 g2164 i0 88.6 3.144 44 5 52.8 0 1 132 171 214 MFO0965902.1 biopolymer transporter Tol [Gemmataceae bacterium] diamond 786 85.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
29941307 29941307 PRJNA1082072_P_NODE_2251_length_249_cov_0.875000_g2244_i0 PRJNA1082072 2251 249 0.875 2.17875 Planctomycetota bacterium 2026780 Bacteria Bacteria 46.2 0.00256   NR MBC8871848.1 2026780 g2244 i0 43.2 1.85542168674699 74 37 89.2 3 231 10 1089 1157 MBC8871848.1 DUF4347 domain-containing protein [Planctomycetota bacterium] diamond 462 46.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30312199 30312199 PRJNA1082072_P_NODE_1612_length_280_cov_1.115942_g1605_i0 PRJNA1082072 1612 280 1.115942 3.1246376 root 1 Root_unresolved Root_unresolved 133 2.18e-36   NR MCB1084310.1 34094 g1605 i0 70.7 3.94285714285714 92 27 98.6 0 280 5 39 130 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 1104 133 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
30415404 30415404 PRJNA1082072_P_NODE_2513_length_246_cov_0.890173_g2506_i0 PRJNA1082072 2513 246 0.890173 2.18982558 Opitutia bacterium 2026771 Bacteria Bacteria 42.4 0.0407   NR MFM9001903.1 2026771 g2506 i0 34.9 0.768292682926829 63 36 70.7 1 176 3 116 178 MFM9001903.1 hypothetical protein [Opitutia bacterium] diamond 189 42.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium
30415405 30415405 PRJNA1082072_P_NODE_2973_length_241_cov_0.916667_g2966_i0 PRJNA1082072 2973 241 0.916667 2.20916747 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 60.1 2.87e-8   NR MBN8246635.1 2026799 g2966 i0 33.3 3.4356846473029 60 40 74.7 0 241 62 753 812 MBN8246635.1 preprotein translocase subunit SecA [Verrucomicrobiota bacterium] diamond 828 60.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30659241 30659241 PRJNA1082072_P_NODE_1493_length_286_cov_1.807512_g1486_i0 PRJNA1082072 1493 286 1.807512 5.16948432 Pseudomonadati 3379134 Bacteria Bacteria 57.8 3.1e-7   NR HLX60008.1 2026780 g1486 i0 48.6 1.5 72 29 75.5 2 66 281 221 284 HLX60008.1 phosphoesterase [Planctomycetota bacterium] diamond 429 57.8 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30794095 30794095 PRJNA1082072_P_NODE_2814_length_242_cov_1.822485_g2807_i0 PRJNA1082072 2814 242 1.822485 4.4104137 Planctomycetota bacterium 2026780 Bacteria Bacteria 59.7 3.94e-8   NR MFH1921320.1 2026780 g2807 i0 41.3 3.83057851239669 75 43 93 1 232 8 887 960 MFH1921320.1 PKD domain-containing protein [Planctomycetota bacterium] diamond 927 59.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31805869 31805869 PRJNA1082072_P_NODE_1137_length_324_cov_2.091633_g1130_i0 PRJNA1082072 1137 324 2.091633 6.77689092 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 85.9 7.16e-17   NR MBN2505827.1 2026799 g1130 i0 45 2.83333333333333 111 50 98.1 4 320 3 416 520 MBN2505827.1 HYR domain-containing protein [Verrucomicrobiota bacterium] diamond 918 85.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32027401 32027401 PRJNA1082072_P_NODE_2978_length_241_cov_0.916667_g2971_i0 PRJNA1082072 2978 241 0.916667 2.20916747 Phycisphaerae bacterium 2026778 Bacteria Bacteria 59.3 5.31e-8   NR MCK4659826.1 2026778 g2971 i0 43.9 0.821576763485477 66 35 82.2 1 40 237 91 154 MCK4659826.1 hypothetical protein [Phycisphaerae bacterium] diamond 198 59.3 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
32249183 32249183 PRJNA1082072_P_NODE_218_length_636_cov_2.296625_g211_i0 PRJNA1082072 218 636 2.296625 14.606535 Zavarzinella formosa 360055 Bacteria Bacteria 62 3.44e-7   NR WP_020468205.1 360055 g211 i0 37.9 0.660377358490566 140 60 56.1 6 21 377 1733 1866 WP_020468205.1 beta strand repeat-containing protein [Zavarzinella formosa] diamond 420 62 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Zavarzinella Zavarzinella formosa
32525406 32525406 PRJNA1082072_P_NODE_379_length_492_cov_1.930788_g372_i0 PRJNA1082072 379 492 1.930788 9.49947696 Pseudomonadati 3379134 Bacteria Bacteria 80.9 2.88e-14   NR MFN0136844.1 2026778 g372 i0 39 2.70121951219512 154 84 93.3 4 32 490 1099 1243 MFN0136844.1 choice-of-anchor tandem repeat NxxGxxAF-containing protein [Phycisphaerae bacterium] diamond 1329 81.6 0.991421568627451 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;