contig_metadata
5 rows where bioproject = "PRJNA1082072", tax_clade = "Bacteria candidate phyla" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28457226 | 28457226 | PRJNA1082072_P_NODE_2086_length_251_cov_0.865169_g2079_i0 | PRJNA1082072 | 2086 | 251 | 0.865169 | 2.17157419 | Candidatus Methylomirabilota bacterium | 2072417 | Bacteria | Bacteria | 108 | 3.91e-25 | NR | HEV8676355.1 | 2072417 | g2079 | i0 | 67.5 | 0.956175298804781 | 80 | 26 | 95.6 | 0 | 9 | 248 | 22 | 101 | HEV8676355.1 FtsX-like permease family protein [Candidatus Methylomirabilota bacterium] | diamond | 240 | 108 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Methylomirabilota | Candidatus Methylomirabilota bacterium | ||||||
| 29656487 | 29656487 | PRJNA1082072_P_NODE_1990_length_255_cov_1.412088_g1983_i0 | PRJNA1082072 | 1990 | 255 | 1.412088 | 3.6008244 | Patescibacteria group bacterium | 2052139 | Bacteria | Bacteria | 42.7 | 0.0387 | NR | MEK7154751.1 | 2052139 | g1983 | i0 | 35.9 | 0.752941176470588 | 64 | 41 | 75.3 | 0 | 52 | 243 | 64 | 127 | MEK7154751.1 methyltransferase domain-containing protein [Patescibacteria group bacterium] | diamond | 192 | 42.7 | 1 | Bacteria | Bacteria candidate phyla | Patescibacteria group bacterium | |||||||
| 30067422 | 30067422 | PRJNA1082072_P_NODE_2212_length_250_cov_0.870056_g2205_i0 | PRJNA1082072 | 2212 | 250 | 0.870056 | 2.17514 | Candidatus Dependentiae bacterium | 2030827 | Bacteria | Bacteria | 67.4 | 1.6e-12 | NR | RTL06915.1 | 2030827 | g2205 | i0 | 65.1 | 0.516 | 43 | 15 | 51.6 | 0 | 247 | 119 | 40 | 82 | RTL06915.1 MAG: hypothetical protein EKK58_03725 [Candidatus Dependentiae bacterium] | diamond | 129 | 67.4 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Babelota bacterium | |||||||
| 31204486 | 31204486 | PRJNA1082072_P_NODE_975_length_343_cov_1.711111_g968_i0 | PRJNA1082072 | 975 | 343 | 1.711111 | 5.86911073 | Candidatus Babelota bacterium | 2030827 | Bacteria | Bacteria | 129 | 9.329999999999999e-35 | NR | MCA9770713.1 | 2030827 | g968 | i0 | 63.2 | 0.927113702623907 | 106 | 35 | 92.7 | 1 | 2 | 319 | 59 | 160 | MCA9770713.1 ribosomal protein L13e [Candidatus Dependentiae bacterium] | diamond | 318 | 129 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Babelota bacterium | |||||||
| 32470545 | 32470545 | PRJNA1082072_P_NODE_2659_length_245_cov_0.895349_g2652_i0 | PRJNA1082072 | 2659 | 245 | 0.895349 | 2.19360505 | Candidatus Binataceae bacterium | 2785449 | Bacteria | Bacteria | 112 | 1.3e-27 | NR | HLI79627.1 | 2785449 | g2652 | i0 | 67.1 | 1.95918367346939 | 79 | 25 | 95.5 | 1 | 3 | 236 | 65 | 143 | HLI79627.1 efflux RND transporter periplasmic adaptor subunit [Candidatus Binataceae bacterium] | diamond | 480 | 112 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Binatota | Candidatus Binatia | Candidatus Binatales | Candidatus Binataceae | Candidatus Binataceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;