RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1078753", tax_phylum = "Thermoplasmatota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1078753 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28574773 28574773 PRJNA1078753_P_NODE_30587_length_249_cov_0.875000_g30391_i0 PRJNA1078753 30587 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 69.7 9.53e-12   NR HIH97705.1 1906666 g30391 i0 50 2.6144578313253 70 34 84.3 1 19 228 28 96 HIH97705.1 Gfo/Idh/MocA family oxidoreductase [Thermoplasmata archaeon] diamond 651 69.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30225411 30225411 PRJNA1078753_P_NODE_7752_length_391_cov_0.965409_g7556_i0 PRJNA1078753 7752 391 0.965409 3.77474919 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 46.2 0.0117   NR MDP6905855.1 2670411 g7556 i0 45 0.928388746803069 60 31 46 1 363 184 464 521 MDP6905855.1 S8 family serine peptidase [Candidatus Thalassarchaeaceae archaeon] diamond 363 46.2 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
31995743 31995743 PRJNA1078753_P_NODE_36358_length_245_cov_0.895349_g36162_i0 PRJNA1078753 36358 245 0.895349 2.19360505 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 46.2 0.00231   NR MEK9694285.1 2163009 g36162 i0 84 0.306122448979592 25 4 30.6 0 169 243 1 25 MEK9694285.1 DUF927 domain-containing protein [Candidatus Poseidoniales archaeon] diamond 75 46.2 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;