RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1078753" and tax_phylum = "Promethearchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Promethearchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1078753 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27596166 27596166 PRJNA1078753_P_NODE_29464_length_250_cov_0.870056_g29268_i0 PRJNA1078753 29464 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 94.4 2.08e-20   NR OLS14679.1 1849166 g29268 i0 55.4 1.992 83 37 99.6 0 1 249 131 213 OLS14679.1 MAG: arsenite efflux membrane protein ArsB [Promethearchaeota archaeon CR_4] diamond 498 94.4 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon CR_4
31363206 31363206 PRJNA1078753_P_NODE_39036_length_244_cov_0.900585_g38840_i0 PRJNA1078753 39036 244 0.900585 2.1974274 Promethearchaeota archaeon 2053489 Archaea Archaea 79.3 3.42e-15   NR NVM35920.1 2053489 g38840 i0 55.1 2.90163934426229 78 31 95.9 2 240 7 57 130 NVM35920.1 methyltransferase domain-containing protein [Promethearchaeota archaeon] diamond 708 79.3 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;