RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA1078753", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 11 ✖

tax_phylum 1

  • Negarnaviricota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1078753 · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2292304 2292304 PRJNA1078753_P_NODE_41662_length_242_cov_0.911243_g41466_i0 PRJNA1078753 41662 242 0.911243 2.20520806 Paramyxoviridae 11158 Viruses Viruses 448 2.3799999999999995e-121   NTclustered gi|2721617856|gb|PP711545.1| 251774 g41466 i0 100 68.2148760330578 242 0 100 0 1 242 13003 12762 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 16508 448 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
3567679 3567679 PRJNA1078753_P_NODE_9103_length_368_cov_1.044068_g8907_i0 PRJNA1078753 9103 368 1.044068 3.84217024 Paramyxoviridae 11158 Viruses Viruses 675 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g8907 i0 99.728 85.2798913043478 368 1 100 0 1 368 1656 1289 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 31383 680 0.992647058823529 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
9945008 9945008 PRJNA1078753_P_NODE_1668_length_746_cov_1.306092_g1494_i0 PRJNA1078753 1668 746 1.306092 9.74344632 Orthorubulavirus 2560195 Viruses Viruses 1367 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g1494 i0 99.732 73.3632707774799 746 2 100 0 1 746 4609 3864 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 54729 1373 0.995630007283321 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
12495740 12495740 PRJNA1078753_P_NODE_31370_length_248_cov_2.640000_g31174_i0 PRJNA1078753 31370 248 2.64 6.5472 Paramyxoviridae 11158 Viruses Viruses 459 1.13e-124   NTclustered gi|2721617856|gb|PP711545.1| 251774 g31174 i0 100 96.9838709677419 248 0 100 0 1 248 4540 4787 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 24052 459 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
15044525 15044525 PRJNA1078753_P_NODE_19332_length_281_cov_1.475962_g19136_i0 PRJNA1078753 19332 281 1.475962 4.14745322 Paramyxoviridae 11158 Viruses Viruses 520 5.909999999999999e-143   NTclustered gi|2721617856|gb|PP711545.1| 251774 g19136 i0 100 68.9964412811388 281 0 100 0 1 281 2514 2234 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 19388 520 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
16319307 16319307 PRJNA1078753_P_NODE_12693_length_326_cov_1.818182_g12497_i0 PRJNA1078753 12693 326 1.818182 5.92727332 Paramyxoviridae 11158 Viruses Viruses 597 3.139999999999999e-166   NTclustered gi|2721617856|gb|PP711545.1| 251774 g12497 i0 99.693 83.9815950920245 326 1 100 0 1 326 6500 6175 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 27378 603 0.990049751243781 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
17594714 17594714 PRJNA1078753_P_NODE_30214_length_249_cov_0.875000_g30018_i0 PRJNA1078753 30214 249 0.875 2.17875 Paramyxoviridae 11158 Viruses Viruses 460 3.16e-125   NTclustered gi|2721617856|gb|PP711545.1| 251774 g30018 i0 100 67.6987951807229 249 0 100 0 1 249 2538 2786 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 16857 460 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
20143315 20143315 PRJNA1078753_P_NODE_30836_length_249_cov_0.875000_g30640_i0 PRJNA1078753 30836 249 0.875 2.17875 Orthorubulavirus 2560195 Viruses Viruses 460 3.16e-125   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g30640 i0 100 68.7228915662651 249 0 100 0 1 249 6482 6234 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 17112 460 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
21418885 21418885 PRJNA1078753_P_NODE_1737_length_735_cov_1.122356_g1561_i0 PRJNA1078753 1737 735 1.122356 8.2493166 Orthorubulavirus 2560195 Viruses Viruses 1347 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g1561 i0 99.728 97.9931972789116 735 2 100 0 1 735 5350 4616 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 72025 1347 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
29941291 29941291 PRJNA1078753_P_NODE_4011_length_513_cov_2.588636_g3817_i0 PRJNA1078753 4011 513 2.588636 13.27970268 African cichlid piscichuvirus 3065075 Viruses Viruses 91.7 6.69e-18   NR WLN26256.1 3065075 g3817 i0 51.7 0.508771929824561 87 42 50.9 0 250 510 229 315 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 261 91.7 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
31512813 31512813 PRJNA1078753_P_NODE_13256_length_321_cov_1.495968_g13060_i0 PRJNA1078753 13256 321 1.495968 4.80205728 Chuvivirus 2842604 Viruses Viruses 131 1.17e-33   NR WET19887.1 2842604 g13060 i0 64.2 1.98130841121495 106 38 99.1 0 2 319 243 348 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 636 131 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;