RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1078753" and tax_phylum = "Candidatus Thorarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Thorarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1078753 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29490348 29490348 PRJNA1078753_P_NODE_40410_length_243_cov_0.905882_g40214_i0 PRJNA1078753 40410 243 0.905882 2.20129326 Archaea 2157 Archaea Archaea 73.6 4.79e-13   NR KXH76097.1 1706443 g40214 i0 49.3 5.40740740740741 73 36 90.1 1 220 2 4 75 KXH76097.1 MAG: saccharopine dehydrogenase [Candidatus Thorarchaeota archaeon SMTZ-45] diamond 1314 74.3 0.990578734858681 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon SMTZ-45

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;