RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1078753" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1078753 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29404322 29404322 PRJNA1078753_P_NODE_20869_length_275_cov_1.148515_g20673_i0 PRJNA1078753 20869 275 1.148515 3.15841625 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 90.9 4.11e-19   NR MBI4860408.1 2053586 g20673 i0 61.2 0.730909090909091 67 26 73.1 0 36 236 249 315 MBI4860408.1 hypothetical protein [Candidatus Rifleibacteriota bacterium] diamond 201 90.9 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
29878041 29878041 PRJNA1078753_P_NODE_19551_length_280_cov_1.487923_g19355_i0 PRJNA1078753 19551 280 1.487923 4.1661844 Candidatus Riflebacteria bacterium HGW-Riflebacteria-2 2013830 Bacteria Bacteria 67.8 8.97e-11   NR PKL49975.1 2013830 g19355 i0 66 0.503571428571429 47 16 50.4 0 147 7 17 63 PKL49975.1 MAG: NAD-dependent malic enzyme [Candidatus Riflebacteria bacterium HGW-Riflebacteria-2] diamond 141 67.8 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Riflebacteria bacterium HGW-Riflebacteria-2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;