RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1078753" and tax_phylum = "Candidatus Magasanikiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Magasanikiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1078753 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24418392 24418392 PRJNA1078753_P_NODE_20140_length_278_cov_1.156098_g19944_i0 PRJNA1078753 20140 278 1.156098 3.21395244 root 1 Root_unresolved Root_unresolved 82 3.98e-16   NR OGH72446.1 1798678 g19944 i0 49.5 4.88848920863309 91 43 98.2 2 3 275 3 90 OGH72446.1 MAG: NAD-dependent dehydratase [Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_02_FULL_44_13] diamond 1359 82 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_02_FULL_44_13
29143444 29143444 PRJNA1078753_P_NODE_39769_length_243_cov_0.905882_g39573_i0 PRJNA1078753 39769 243 0.905882 2.20129326 Bacteria 2 Bacteria Bacteria 52 1.97e-5   NR KKP59606.1 1619045 g39573 i0 50 1.55555555555556 60 29 72.8 1 224 48 1 60 KKP59606.1 MAG: Glutamyl-tRNA(Gln) amidotransferase subunit A [Candidatus Magasanikbacteria bacterium GW2011_GWC2_34_16] diamond 378 52 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikbacteria bacterium GW2011_GWC2_34_16
29719769 29719769 PRJNA1078753_P_NODE_9570_length_361_cov_1.927083_g9374_i0 PRJNA1078753 9570 361 1.927083 6.95676963 Candidatus Magasanikiibacteriota bacterium 2026717 Bacteria Bacteria 57 1.34e-6   NR MFA7245001.1 2026717 g9374 i0 40.3 2.41828254847645 67 40 55.7 0 355 155 143 209 MFA7245001.1 hypothetical protein [Candidatus Magasanikiibacteriota bacterium] diamond 873 57 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;