RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1078753" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1078753 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26678864 26678864 PRJNA1078753_P_NODE_16241_length_297_cov_1.375000_g16045_i0 PRJNA1078753 16241 297 1.375 4.08375 Bacteria 2 Bacteria Bacteria 76.6 8.88e-14   NR HSQ01483.1 2052315 g16045 i0 41.3 5.65656565656566 92 51 91.9 3 1 273 562 651 HSQ01483.1 lysyl oxidase family protein [Candidatus Dormiibacterota bacterium] diamond 1680 76.6 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
27731161 27731161 PRJNA1078753_P_NODE_28104_length_251_cov_0.865169_g27908_i0 PRJNA1078753 28104 251 0.865169 2.17157419 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 51.6 2.88e-5   NR HEV3103892.1 2052315 g27908 i0 47.6 0.50199203187251 42 22 50.2 0 2 127 91 132 HEV3103892.1 6-bladed beta-propeller [Candidatus Dormiibacterota bacterium] diamond 126 51.6 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29869398 29869398 PRJNA1078753_P_NODE_33291_length_247_cov_0.885057_g33095_i0 PRJNA1078753 33291 247 0.885057 2.18609079 Bacillati 1783272 Bacteria Bacteria 115 6.48e-30   NR HEV3124762.1 2052315 g33095 i0 63.3 5.74493927125506 79 29 96 0 2 238 29 107 HEV3124762.1 VOC family protein [Candidatus Dormiibacterota bacterium] diamond 1419 115 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;