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contig_metadata

15 rows where bioproject = "PRJNA1078753" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 15 ✖

bioproject 1

  • PRJNA1078753 · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10395897 10395897 PRJNA1078753_P_NODE_32109_length_248_cov_0.880000_g31913_i0 PRJNA1078753 32109 248 0.88 2.1824 Methanococcus voltae 2188 Archaea Archaea 56.5 0.002   NTclustered gi|2891705001|gb|CP178160.1| 523842 g31913 i0 97.059 0.42741935483871 34 0 13 1 170 202 191348 191381 Methanococcus voltae PS chromosome, complete genome blastn 106 56.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus voltae
23144713 23144713 PRJNA1078753_P_NODE_20459_length_276_cov_2.290640_g20263_i0 PRJNA1078753 20459 276 2.29064 6.3221664 Methanoculleus palmolei 72612 Archaea Archaea 52.8 0.025   NTclustered gi|2618162486|gb|CP137641.1| 72612 g20263 i0 100 0.101449275362319 28 0 10 0 229 256 1495716 1495689 Methanoculleus palmolei strain DSM 4273 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus palmolei
23144808 23144808 PRJNA1078753_P_NODE_33999_length_247_cov_0.885057_g33803_i0 PRJNA1078753 33999 247 0.885057 2.18609079 Halalkalicoccus jeotgali 413810 Archaea Archaea 202 2.0899999999999999e-47   NTclustered gi|299123054|gb|CP002062.1| 795797 g33803 i0 83.721 0.870445344129555 215 34 87 1 33 247 1247408 1247195 Halalkalicoccus jeotgali B3, complete genome blastn 215 202 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
27446947 27446947 PRJNA1078753_P_NODE_35343_length_246_cov_0.890173_g35147_i0 PRJNA1078753 35343 246 0.890173 2.18982558 Methanobrevibacter sp. 66852 Archaea Archaea 42.7 0.0392   NR WP_292800363.1 66852 g35147 i0 34.1 1 82 52 98.8 2 2 244 769 849 WP_292800363.1 hypothetical protein [Methanobrevibacter sp.] diamond 246 42.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
28574773 28574773 PRJNA1078753_P_NODE_30587_length_249_cov_0.875000_g30391_i0 PRJNA1078753 30587 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 69.7 9.53e-12   NR HIH97705.1 1906666 g30391 i0 50 2.6144578313253 70 34 84.3 1 19 228 28 96 HIH97705.1 Gfo/Idh/MocA family oxidoreductase [Thermoplasmata archaeon] diamond 651 69.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28583534 28583534 PRJNA1078753_P_NODE_27707_length_251_cov_0.865169_g27511_i0 PRJNA1078753 27707 251 0.865169 2.17157419 Haloferacaceae archaeon 2080321 Archaea Archaea 80.1 3.91e-17   NR MFB6080708.1 2080321 g27511 i0 58.6 2.0796812749004 58 24 69.3 0 200 27 1 58 MFB6080708.1 Rieske (2Fe-2S) protein [Haloferacaceae archaeon] diamond 522 80.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae   Haloferacaceae archaeon
29143445 29143445 PRJNA1078753_P_NODE_7089_length_405_cov_1.855422_g6893_i0 PRJNA1078753 7089 405 1.855422 7.5144591 root 1 Root_unresolved Root_unresolved 57 2.42e-6   NR WP_227230915.1 1126234 g6893 i0 42.9 3.26666666666667 84 44 60.7 3 159 404 1540 1621 WP_227230915.1 malectin domain-containing carbohydrate-binding protein [Salinirubrum litoreum] diamond 1323 57.4 0.993031358885017 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Salinirubrum Salinirubrum litoreum
29530648 29530648 PRJNA1078753_P_NODE_32570_length_248_cov_0.880000_g32374_i0 PRJNA1078753 32570 248 0.88 2.1824 Halococcus sediminicola 1264579 Archaea Archaea 128 1.66e-33   NR WP_049996319.1 1264579 g32374 i0 73.2 0.991935483870968 82 22 99.2 0 3 248 96 177 WP_049996319.1 hypothetical protein [Halococcus sediminicola] diamond 246 128 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus sediminicola
30067387 30067387 PRJNA1078753_P_NODE_13792_length_316_cov_1.777778_g13596_i0 PRJNA1078753 13792 316 1.777778 5.61777848 Methanothrix sp. 90426 Archaea Archaea 47.8 0.00145   NR MCX6673115.1 90426 g13596 i0 31 0.79746835443038 84 51 76.9 3 244 2 64 143 MCX6673115.1 hypothetical protein [Methanothrix sp.] diamond 252 47.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
30162002 30162002 PRJNA1078753_P_NODE_15712_length_301_cov_1.188596_g15516_i0 PRJNA1078753 15712 301 1.188596 3.57767396 Thermococcus eurythermalis 1505907 Archaea Archaea 47 0.00251   NR WP_158506642.1 1505907 g15516 i0 50 0.498338870431894 50 24 49.8 1 286 137 630 678 WP_158506642.1 lectin-like domain-containing protein [Thermococcus eurythermalis] diamond 150 47 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus eurythermalis
30225411 30225411 PRJNA1078753_P_NODE_7752_length_391_cov_0.965409_g7556_i0 PRJNA1078753 7752 391 0.965409 3.77474919 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 46.2 0.0117   NR MDP6905855.1 2670411 g7556 i0 45 0.928388746803069 60 31 46 1 363 184 464 521 MDP6905855.1 S8 family serine peptidase [Candidatus Thalassarchaeaceae archaeon] diamond 363 46.2 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
30541347 30541347 PRJNA1078753_P_NODE_18853_length_283_cov_1.604762_g18657_i0 PRJNA1078753 18853 283 1.604762 4.54147646 Methanotrichaceae archaeon 2595067 Archaea Archaea 47.8 4.92e-4   NR NPV61782.1 2595067 g18657 i0 29.2 0.943462897526502 89 54 91.2 3 17 274 61 143 NPV61782.1 hypothetical protein [Methanotrichaceae archaeon] diamond 267 47.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae   Methanotrichaceae archaeon
31394821 31394821 PRJNA1078753_P_NODE_24136_length_262_cov_1.322751_g23940_i0 PRJNA1078753 24136 262 1.322751 3.46560762 Methanolobus bombayensis 38023 Archaea Archaea 46.2 0.00277   NR WP_209615765.1 38023 g23940 i0 48.6 0.400763358778626 35 18 40.1 0 249 145 246 280 WP_209615765.1 C2H2-type zinc finger protein [Methanolobus bombayensis] diamond 105 46.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus bombayensis
31995743 31995743 PRJNA1078753_P_NODE_36358_length_245_cov_0.895349_g36162_i0 PRJNA1078753 36358 245 0.895349 2.19360505 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 46.2 0.00231   NR MEK9694285.1 2163009 g36162 i0 84 0.306122448979592 25 4 30.6 0 169 243 1 25 MEK9694285.1 DUF927 domain-containing protein [Candidatus Poseidoniales archaeon] diamond 75 46.2 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
32375517 32375517 PRJNA1078753_P_NODE_839_length_1008_cov_1.459893_g702_i0 PRJNA1078753 839 1008 1.459893 14.71572144 Methanobrevibacter millerae 230361 Archaea Archaea 55.1 3.77e-4   NR WP_303737944.1 230361 g702 i0 31.4 0.50297619047619 169 94 47.9 7 925 443 884 1038 WP_303737944.1 hypothetical protein, partial [Methanobrevibacter millerae] diamond 507 55.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter millerae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;