RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1078753", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1078753 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30058770 30058770 PRJNA1078753_P_NODE_21351_length_273_cov_1.195000_g21155_i0 PRJNA1078753 21351 273 1.195 3.26235 Eukaryota 2759 Fungi Fungi 43.5 0.00569   NR KRH95079.1 146866 g21155 i0 37.8 2.42857142857143 45 28 49.5 0 38 172 37 81 KRH95079.1 Polyadenylation factor I complex, subunit FIP1 [Pseudoloma neurophilia] diamond 663 43.5 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
32533784 32533784 PRJNA1078753_P_NODE_15839_length_300_cov_1.356828_g15643_i0 PRJNA1078753 15839 300 1.356828 4.070484 Dictyocoela muelleri 279532 Fungi Fungi 53.1 1.69e-5   NR KAG0435384.1 279532 g15643 i0 35.6 1.93 101 54 96 4 288 1 580 674 KAG0435384.1 LINE-1 retrotransposable element ORF2 protein [Dictyocoela muelleri] diamond 579 53.1 1 Eukaryota Opisthokonta Fungi Microsporidia       Dictyocoela Dictyocoela muelleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;