RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1078753", tax_clade = "Pithoviruses" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_clade 1

  • Pithoviruses · 3 ✖

bioproject 1

  • PRJNA1078753 · 3 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18044409 18044409 PRJNA1078753_P_NODE_4075_length_510_cov_1.778032_g3880_i0 PRJNA1078753 4075 510 1.778032 9.0679632 Solumvirus sp. 2487773 Viruses Viruses 225 1.02e-71   NR AYV86227.1 2487773 g3880 i0 78.3 0.841176470588235 143 31 84.1 0 431 3 37 179 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 429 225 1 Viruses Pithoviruses             Solumvirus sp.
29404347 29404347 PRJNA1078753_P_NODE_6529_length_419_cov_1.916185_g6333_i0 PRJNA1078753 6529 419 1.916185 8.02881515 Cedratvirus A11 1903266 Viruses Viruses 47 0.00687   NR YP_009329127.1 1903266 g6333 i0 29.9 0.98090692124105 137 74 88.1 4 408 40 102 230 YP_009329127.1 EGF-like [Cedratvirus A11] diamond 411 47 1 Viruses Pithoviruses           Alphacedratvirus Alphacedratvirus aljazairmassiliense
31236390 31236390 PRJNA1078753_P_NODE_13015_length_323_cov_2.768000_g12819_i0 PRJNA1078753 13015 323 2.768 8.94064 Solumvirus sp. 2487773 Viruses Viruses 102 3.0899999999999993e-24   NR AYV86227.1 2487773 g12819 i0 59.3 0.752321981424149 81 33 75.2 0 243 1 44 124 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 243 102 1 Viruses Pithoviruses             Solumvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;