RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1078753", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA1078753 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31584633 31584633 PRJNA1078753_P_NODE_21836_length_271_cov_1.313131_g21640_i0 PRJNA1078753 21836 271 1.313131 3.55858501 Fidelibacterota bacterium 2026760 Bacteria Bacteria 86.7 5.42e-18   NR MEE9572946.1 2026760 g21640 i0 43 0.952029520295203 86 49 95.2 0 12 269 78 163 MEE9572946.1 glycosyl hydrolase family 18 protein [Fidelibacterota bacterium] diamond 258 86.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32745718 32745718 PRJNA1078753_P_NODE_22260_length_269_cov_1.571429_g22064_i0 PRJNA1078753 22260 269 1.571429 4.22714401 Pseudomonadati 3379134 Bacteria Bacteria 106 1.28e-24   NR MEA1881553.1 2026760 g22064 i0 58.8 9.53531598513011 85 35 94.8 0 1 255 346 430 MEA1881553.1 M28 family metallopeptidase [Fidelibacterota bacterium] diamond 2565 106 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32754150 32754150 PRJNA1078753_P_NODE_35840_length_246_cov_0.890173_g35644_i0 PRJNA1078753 35840 246 0.890173 2.18982558 Fidelibacterota bacterium 2026760 Bacteria Bacteria 44.7 0.00817   NR MDP7529577.1 2026760 g35644 i0 34.5 1.02439024390244 84 45 90.2 3 223 2 587 670 MDP7529577.1 Ig-like domain-containing protein [Fidelibacterota bacterium] diamond 252 44.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;