RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1078753", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1078753 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28299127 28299127 PRJNA1078753_P_NODE_31746_length_248_cov_0.880000_g31550_i0 PRJNA1078753 31746 248 0.88 2.1824 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 53.9 3.28e-6   NR MDK1020987.1 2030809 g31550 i0 42.7 0.907258064516129 75 41 90.7 1 24 248 31 103 MDK1020987.1 plastocyanin/azurin family copper-binding protein [Candidatus Hydrogenedentota bacterium] diamond 225 53.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28930743 28930743 PRJNA1078753_P_NODE_33468_length_247_cov_0.885057_g33272_i0 PRJNA1078753 33468 247 0.885057 2.18609079 Candidatus Hydrogenedens sp. 2654184 Bacteria Bacteria 43.1 0.029   NR MBI1318064.1 2654184 g33272 i0 36.9 0.789473684210526 65 28 63.2 1 80 235 231 295 MBI1318064.1 hypothetical protein [Candidatus Hydrogenedens sp.] diamond 195 43.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Hydrogenedentia Candidatus Hydrogenedentales Candidatus Hydrogenedentaceae Candidatus Hydrogenedens Candidatus Hydrogenedens sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;