RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1078753", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA1078753 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27446961 27446961 PRJNA1078753_P_NODE_883_length_991_cov_2.569717_g742_i0 PRJNA1078753 883 991 2.569717 25.46589547 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 196 1.4899999999999999e-53   NR MBY0276389.1 2838779 g742 i0 39.9 2.82441977800202 303 160 88.4 8 876 1 42 333 MBY0276389.1 hypothetical protein [Candidatus Binatia bacterium] diamond 2799 196 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28069627 28069627 PRJNA1078753_P_NODE_28645_length_250_cov_0.870056_g28449_i0 PRJNA1078753 28645 250 0.870056 2.17514 Pseudomonadati 3379134 Bacteria Bacteria 84.7 1.19e-17   NR HVM85628.1 2838779 g28449 i0 70 3.168 60 18 72 0 180 1 2 61 HVM85628.1 enoyl-CoA hydratase [Candidatus Binatia bacterium] diamond 792 85.1 0.995299647473561 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31932322 31932322 PRJNA1078753_P_NODE_8057_length_385_cov_1.400641_g7861_i0 PRJNA1078753 8057 385 1.400641 5.39246785 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 54.3 1.67e-5   NR HEY2773809.1 2838779 g7861 i0 35.7 0.872727272727273 112 63 84.2 4 8 331 250 356 HEY2773809.1 hypothetical protein [Candidatus Binatia bacterium] diamond 336 54.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32343991 32343991 PRJNA1078753_P_NODE_36139_length_245_cov_1.755814_g35943_i0 PRJNA1078753 36139 245 1.755814 4.3017443 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 82.8 3.05e-16   NR MFI5396415.1 2838779 g35943 i0 51.2 1.00408163265306 82 39 99.2 1 244 2 672 753 MFI5396415.1 SIR2 family protein [Candidatus Binatia bacterium] diamond 246 82.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;