RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1078753", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1078753 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27731157 27731157 PRJNA1078753_P_NODE_23744_length_263_cov_2.147368_g23548_i0 PRJNA1078753 23744 263 2.147368 5.64757784 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 51.2 4.97e-5   NR MBN2246648.1 2052149 g23548 i0 37.4 1.03802281368821 91 52 98.1 3 262 5 158 248 MBN2246648.1 NAD-glutamate dehydrogenase [Candidatus Aminicenantes bacterium] diamond 273 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
30983921 30983921 PRJNA1078753_P_NODE_43854_length_240_cov_2.305389_g43658_i0 PRJNA1078753 43854 240 2.305389 5.5329336 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 54.7 2.28e-6   NR MCI4445030.1 2052149 g43658 i0 39.2 3.95 79 47 97.5 1 4 237 236 314 MCI4445030.1 NAD-glutamate dehydrogenase [Candidatus Aminicenantes bacterium] diamond 948 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
32493570 32493570 PRJNA1078753_P_NODE_7699_length_392_cov_1.206897_g7503_i0 PRJNA1078753 7699 392 1.206897 4.73103624 Pseudomonadati 3379134 Bacteria Bacteria 105 1.0799999999999999e-23   NR MDH4257541.1 2052149 g7503 i0 43.8 2.50255102040816 105 59 80.4 0 317 3 200 304 MDH4257541.1 cellulase family glycosylhydrolase [Candidatus Aminicenantes bacterium] diamond 981 105 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;