RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1074408" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1074408 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28867471 28867471 PRJNA1074408_S_NODE_2788_length_274_cov_20.995671_g2658_i0 PRJNA1074408 2788 274 20.995671 57.52813854 Haliotis asinina 109174 Mollusca Mollusca 43.5 0.0267   NR XP_067657806.1 109174 g2658 i0 35.4 1.4014598540146 65 36 70.1 2 36 227 144 203 XP_067657806.1 uncharacterized protein [Haliotis asinina] diamond 384 43.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
31765619 31765619 PRJNA1074408_S_NODE_3757_length_238_cov_1.230769_g3627_i0 PRJNA1074408 3757 238 1.230769 2.92923022 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 66.6 7.02e-11   NR XP_071172746.1 6550 g3627 i0 57.6 4.48739495798319 59 24 73.1 1 237 64 208 266 XP_071172746.1 dimethyladenosine transferase-like isoform X2 [Mytilus edulis] diamond 1068 67 0.994029850746269 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;