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contig_metadata

5 rows where bioproject = "PRJNA1074408" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA1074408 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1016445 1016445 PRJNA1074408_S_NODE_2701_length_279_cov_6.512712_g2571_i0 PRJNA1074408 2701 279 6.512712 18.17046648 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 510 3.5299999999999996e-140   NTclustered gi|399764281|gb|JQ271792.1| 1215612 g2571 i0 99.642 38.7204301075269 279 1 100 0 1 279 341 63 Cercozoa sp. 900 18S ribosomal RNA gene, partial sequence blastn 10803 510 1 Eukaryota Sar   Cercozoa         Cercozoa sp. 900
2741678 2741678 PRJNA1074408_S_NODE_6203_length_186_cov_4.447552_g6073_i0 PRJNA1074408 6203 186 4.447552 8.27244672 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 287 4e-73   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g6073 i0 95.055 104.41935483871 182 9 98 0 1 182 3675 3856 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 19422 287 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
17594305 17594305 PRJNA1074408_S_NODE_3274_length_255_cov_3.169811_g3144_i0 PRJNA1074408 3274 255 3.169811 8.08301805 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 472 1.5e-128   NTclustered gi|2493707699|dbj|LC764482.1| 45107 g3144 i0 100 100 255 0 100 0 1 255 744 998 Heteromita globosa LAP3-2017 gene for 18S rRNA, partial sequence blastn 25500 472 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
18042719 18042719 PRJNA1074408_S_NODE_3975_length_232_cov_3.269841_g3845_i0 PRJNA1074408 3975 232 3.269841 7.58603112 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 274 4.07e-69   NTclustered gi|238617605|gb|FJ973380.1| 45107 g3845 i0 87.931 38.2198275862069 232 28 100 0 1 232 1645 1876 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 8867 274 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
24416920 24416920 PRJNA1074408_S_NODE_4760_length_212_cov_2.272189_g4630_i0 PRJNA1074408 4760 212 2.272189 4.81704068 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 364 2.109999999999999e-96   NTclustered gi|238617605|gb|FJ973380.1| 45107 g4630 i0 97.642 90.7688679245283 212 5 100 0 1 212 1357 1568 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 19243 364 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;