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contig_metadata

21 rows where bioproject = "PRJNA1074408" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 21 ✖

bioproject 1

  • PRJNA1074408 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12944726 12944726 PRJNA1074408_S_NODE_5491_length_198_cov_0.929032_g5361_i0 PRJNA1074408 5491 198 0.929032 1.83948336 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 361 2.51e-95   NTclustered gi|221185864|gb|FJ577811.1| 590481 g5361 i0 99.497 24.4141414141414 199 0 100 1 1 198 907 709 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 4834 361 1 Eukaryota Amoebozoa             uncultured Amoebozoa
21867803 21867803 PRJNA1074408_S_NODE_8198_length_164_cov_1.983471_g8068_i0 PRJNA1074408 8198 164 1.983471 3.25289244 Physarum polycephalum 5791 Evosea other_Eukaryota 111 2.23e-20   NTclustered gi|15284027|dbj|AB070525.1| 5791 g8068 i0 80.132 16.1219512195122 151 28 91 2 1 150 211 360 Physarum polycephalum ub1 mRNA for ubiquitin 1, complete cds blastn 2644 111 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
22693455 22693455 PRJNA1074408_S_NODE_6498_length_183_cov_1.028571_g6368_i0 PRJNA1074408 6498 183 1.028571 1.88228493 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 96.3 1.49e-21   NR PRP77617.1 1890364 g6368 i0 68.3 0.983606557377049 60 19 98.4 0 181 2 371 430 PRP77617.1 lysosomal protective protein-like [Planoprotostelium fungivorum] diamond 180 96.3 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27067372 27067372 PRJNA1074408_S_NODE_9762_length_152_cov_0.880734_g9632_i0 PRJNA1074408 9762 152 0.880734 1.33871568 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 61.6 2.24e-9   NR PRP87567.1 1890364 g9632 i0 65.1 0.848684210526316 43 15 84.9 0 9 137 330 372 PRP87567.1 hypothetical protein PROFUN_04594 [Planoprotostelium fungivorum] diamond 129 61.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27193759 27193759 PRJNA1074408_S_NODE_8682_length_160_cov_1.230769_g8552_i0 PRJNA1074408 8682 160 1.230769 1.9692304 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 72.4 5.25e-14   NR XP_004333244.1 1257118 g8552 i0 60.4 0.99375 53 21 99.4 0 1 159 124 176 XP_004333244.1 MAPEG family protein [Acanthamoeba castellanii str. Neff] diamond 159 72.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28141535 28141535 PRJNA1074408_S_NODE_9125_length_156_cov_1.274336_g8995_i0 PRJNA1074408 9125 156 1.274336 1.98796416 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 88.6 5.75e-20   NR PRP85532.1 1890364 g8995 i0 95.5 0.846153846153846 44 2 84.6 0 2 133 153 196 PRP85532.1 hypothetical protein PROFUN_06764 [Planoprotostelium fungivorum] diamond 132 88.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28267410 28267410 PRJNA1074408_S_NODE_4526_length_218_cov_1.508571_g4396_i0 PRJNA1074408 4526 218 1.508571 3.28868478 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 70.1 5.43e-12   NR PRP75079.1 1890364 g4396 i0 53.2 4.10091743119266 77 30 99.1 2 216 1 261 336 PRP75079.1 hypothetical protein PROFUN_03915 [Planoprotostelium fungivorum] diamond 894 70.1 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28362224 28362224 PRJNA1074408_S_NODE_6546_length_182_cov_1.381295_g6416_i0 PRJNA1074408 6546 182 1.381295 2.5139569 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.5 4.01e-16   NR XP_004356622.1 1257118 g6416 i0 76.6 1.64835164835165 47 11 77.5 0 19 159 269 315 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 300 80.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28551919 28551919 PRJNA1074408_S_NODE_8347_length_163_cov_1.200000_g8217_i0 PRJNA1074408 8347 163 1.2 1.956 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 84.3 2.78e-17   NR PRP76312.1 1890364 g8217 i0 68.5 0.993865030674847 54 17 99.4 0 1 162 1309 1362 PRP76312.1 phospholipase D1 [Planoprotostelium fungivorum] diamond 162 84.3 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28741182 28741182 PRJNA1074408_S_NODE_7147_length_175_cov_1.454545_g7017_i0 PRJNA1074408 7147 175 1.454545 2.54545375 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 60.1 4.43e-9   NR XP_004349662.1 1257118 g7017 i0 63.3 0.84 49 18 84 0 168 22 139 187 XP_004349662.1 ribosomal protein L13, putative [Acanthamoeba castellanii str. Neff] diamond 147 60.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29057059 29057059 PRJNA1074408_S_NODE_2588_length_286_cov_1.580247_g2458_i0 PRJNA1074408 2588 286 1.580247 4.51950642 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 143 5.33e-40   NR PRP75505.1 1890364 g2458 i0 74.2 0.975524475524476 93 24 97.6 0 280 2 168 260 PRP75505.1 40S ribosomal protein S4, X isoform-like [Planoprotostelium fungivorum] diamond 279 143 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29215048 29215048 PRJNA1074408_S_NODE_8029_length_166_cov_1.170732_g7899_i0 PRJNA1074408 8029 166 1.170732 1.94341512 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 91.7 7.79e-20   NR PRP75972.1 1890364 g7899 i0 83.3 0.975903614457831 54 9 97.6 0 5 166 892 945 PRP75972.1 callose synthase 12 [Planoprotostelium fungivorum] diamond 162 91.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29846322 29846322 PRJNA1074408_S_NODE_5351_length_200_cov_1.222930_g5221_i0 PRJNA1074408 5351 200 1.22293 2.44586 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 106 3.8e-25   NR PRP81087.1 1890364 g5221 i0 63.6 0.99 66 24 99 0 3 200 366 431 PRP81087.1 glucosidase 2 subunit beta isoform 1 [Planoprotostelium fungivorum] diamond 198 106 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29909642 29909642 PRJNA1074408_S_NODE_6811_length_179_cov_1.411765_g6681_i0 PRJNA1074408 6811 179 1.411765 2.52705935 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 78.6 4.35e-16   NR PRP80408.1 1890364 g6681 i0 69.8 0.888268156424581 53 16 88.8 0 179 21 156 208 PRP80408.1 40S ribosomal protein S9 [Planoprotostelium fungivorum] diamond 159 78.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30446778 30446778 PRJNA1074408_S_NODE_6553_length_182_cov_1.381295_g6423_i0 PRJNA1074408 6553 182 1.381295 2.5139569 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 46.2 9.68e-4   NR PRP80151.1 1890364 g6423 i0 37.7 1.00549450549451 61 37 98.9 1 180 1 290 350 PRP80151.1 hypothetical protein PROFUN_12234 [Planoprotostelium fungivorum] diamond 183 46.2 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30699256 30699256 PRJNA1074408_S_NODE_5114_length_204_cov_2.291925_g4984_i0 PRJNA1074408 5114 204 2.291925 4.675527 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 50.1 6.03e-5   NR PRP85056.1 1890364 g4984 i0 39.7 2.04411764705882 73 30 98.5 3 1 201 861 925 PRP85056.1 hypothetical protein PROFUN_07240 [Planoprotostelium fungivorum] diamond 417 50.1 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30762622 30762622 PRJNA1074408_S_NODE_2714_length_279_cov_1.830508_g2584_i0 PRJNA1074408 2714 279 1.830508 5.10711732 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 97.4 3.4e-21   NR PRP87768.1 1890364 g2584 i0 71.4 0.67741935483871 63 18 67.7 0 278 90 655 717 PRP87768.1 putative origin recognition complex subunit [Planoprotostelium fungivorum] diamond 189 97.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30825688 30825688 PRJNA1074408_S_NODE_5334_length_200_cov_1.528662_g5204_i0 PRJNA1074408 5334 200 1.528662 3.057324 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 49.3 9.76e-5   NR PRP84263.1 1890364 g5204 i0 62.5 0.48 32 12 48 0 104 199 140 171 PRP84263.1 hypothetical protein PROFUN_08283 [Planoprotostelium fungivorum] diamond 96 49.3 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30888955 30888955 PRJNA1074408_S_NODE_7134_length_175_cov_1.818182_g7004_i0 PRJNA1074408 7134 175 1.818182 3.1818185 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 59.7 1.54e-8   NR PRP87353.1 1890364 g7004 i0 51.7 0.994285714285714 58 28 99.4 0 174 1 324 381 PRP87353.1 hypothetical protein PROFUN_01615 [Planoprotostelium fungivorum] diamond 174 59.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31837277 31837277 PRJNA1074408_S_NODE_8977_length_157_cov_1.684211_g8847_i0 PRJNA1074408 8977 157 1.684211 2.64421127 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 40.4 0.0293   NR PRP89770.1 1890364 g8847 i0 64.3 0.535031847133758 28 10 53.5 0 145 62 80 107 PRP89770.1 hypothetical protein PROFUN_00112 [Planoprotostelium fungivorum] diamond 84 40.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32343958 32343958 PRJNA1074408_S_NODE_5199_length_203_cov_1.200000_g5069_i0 PRJNA1074408 5199 203 1.2 2.436 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 102 2.2199999999999994e-23   NR PRP82139.1 1890364 g5069 i0 71.6 0.990147783251232 67 19 99 0 201 1 265 331 PRP82139.1 60S ribosomal export protein [Planoprotostelium fungivorum] diamond 201 102 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;