RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA1074407" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1074407 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18040257 18040257 PRJNA1074407_P_NODE_128735_length_264_cov_1.591623_g124897_i0 PRJNA1074407 128735 264 1.591623 4.20188472 Brachionus 10194 Rotifera other_Eukaryota 144 1.52e-40   NR WOV68823.1 392765 g124897 i0 83.9 2.96590909090909 87 14 98.9 0 3 263 59 145 WOV68823.1 cytochrome c oxidase subunit 3 [Brachionus falcatus] diamond 783 145 0.993103448275862 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus falcatus
29688075 29688075 PRJNA1074407_P_NODE_136430_length_248_cov_0.868571_g132592_i0 PRJNA1074407 136430 248 0.868571 2.15405608 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 82.8 3.23e-16   NR CAF0877343.1 104777 g132592 i0 50.6 0.979838709677419 81 39 96.8 1 242 3 2210 2290 CAF0877343.1 unnamed protein product [Brachionus calyciflorus] diamond 243 82.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
30035879 30035879 PRJNA1074407_P_NODE_135651_length_249_cov_0.863636_g131813_i0 PRJNA1074407 135651 249 0.863636 2.15045364 Brachionus plicatilis 10195 Rotifera other_Eukaryota 103 1.23e-25   NR RNA15550.1 10195 g131813 i0 66.7 0.867469879518072 72 24 86.7 0 249 34 13 84 RNA15550.1 hypothetical protein BpHYR1_027025, partial [Brachionus plicatilis] diamond 216 103 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
30185214 30185214 PRJNA1074407_P_NODE_105892_length_329_cov_0.820312_g102054_i0 PRJNA1074407 105892 329 0.820312 2.69882648 Brachionus 10194 Rotifera other_Eukaryota 46.6 0.00368   NR RNA12279.1 10195 g102054 i0 55 0.802431610942249 40 18 36.5 0 55 174 183 222 RNA12279.1 mate recognition motif repeat [Brachionus plicatilis] diamond 264 46.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
30469875 30469875 PRJNA1074407_P_NODE_132493_length_255_cov_1.252747_g128655_i0 PRJNA1074407 132493 255 1.252747 3.19450485 Brachionus 10194 Rotifera other_Eukaryota 129 8.149999999999999e-34   NR YP_001728980.1 10195 g128655 i0 84.9 2.57647058823529 73 11 85.9 0 220 2 31 103 YP_001728980.1 cytochrome b [Brachionus plicatilis] diamond 657 129 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
30920692 30920692 PRJNA1074407_P_NODE_147234_length_239_cov_0.915663_g143396_i0 PRJNA1074407 147234 239 0.915663 2.18843457 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 78.2 9.66e-15   NR CAF0953685.1 104777 g143396 i0 43.9 1.02928870292887 82 43 99.2 1 3 239 321 402 CAF0953685.1 unnamed protein product, partial [Brachionus calyciflorus] diamond 246 78.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
31268128 31268128 PRJNA1074407_P_NODE_118815_length_290_cov_1.792627_g114977_i0 PRJNA1074407 118815 290 1.792627 5.1986183 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 43.9 0.0237   NR CAF2385174.1 2762512 g114977 i0 35.8 0.693103448275862 67 40 66.2 1 273 82 232 298 CAF2385174.1 unnamed protein product [Rotaria sp. Silwood2] diamond 201 43.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
31710941 31710941 PRJNA1074407_P_NODE_132017_length_256_cov_1.491803_g128179_i0 PRJNA1074407 132017 256 1.491803 3.81901568 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 77.4 2.7e-14   NR CAF0864311.1 104777 g128179 i0 58.3 1.3828125 60 22 68 2 3 176 913 971 CAF0864311.1 unnamed protein product [Brachionus calyciflorus] diamond 354 77.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
32217180 32217180 PRJNA1074407_P_NODE_110458_length_314_cov_1.493776_g106620_i0 PRJNA1074407 110458 314 1.493776 4.69045664 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 101 9.809999999999999e-24   NR CAF0751051.1 104777 g106620 i0 51.6 0.907643312101911 95 45 89.8 1 16 297 82 176 CAF0751051.1 unnamed protein product [Brachionus calyciflorus] diamond 285 101 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;