contig_metadata
25 rows where bioproject = "PRJNA1074407" and tax_phylum = "Mollusca"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10391521 | 10391521 | PRJNA1074407_P_NODE_111789_length_310_cov_1.282700_g107951_i0 | PRJNA1074407 | 111789 | 310 | 1.2827 | 3.97637 | Dreissena polymorpha | 45954 | Mollusca | Mollusca | 65.8 | 3.72e-6 | NTclustered | gi|2364439800|ref|XM_052421432.1| | 45954 | g107951 | i0 | 95.122 | 1.79354838709677 | 41 | 2 | 13 | 0 | 60 | 100 | 82 | 122 | PREDICTED: Dreissena polymorpha uncharacterized transmembrane protein DDB_G0285607-like (LOC127876301), mRNA | blastn | 556 | 65.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Bivalvia | Myida | Dreissenidae | Dreissena | Dreissena polymorpha | |
| 11669344 | 11669344 | PRJNA1074407_P_NODE_85050_length_409_cov_1.127976_g81214_i0 | PRJNA1074407 | 85050 | 409 | 1.127976 | 4.61342184 | Mytilus californianus | 6549 | Mollusca | Mollusca | 52.8 | 0.039 | NTclustered | gi|2334748714|ref|XM_052206278.1| | 6549 | g81214 | i0 | 100 | 0.0684596577017115 | 28 | 0 | 7 | 0 | 10 | 37 | 1735 | 1762 | PREDICTED: Mytilus californianus charged multivesicular body protein 4b-like (LOC127702171), mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Bivalvia | Mytilida | Mytilidae | Mytilus | Mytilus californianus | |
| 12941888 | 12941888 | PRJNA1074407_P_NODE_107151_length_324_cov_1.864542_g103313_i0 | PRJNA1074407 | 107151 | 324 | 1.864542 | 6.04111608 | Littorina saxatilis | 31220 | Mollusca | Mollusca | 211 | 4.74e-50 | NTclustered | gi|2868681933|ref|XM_070325520.1| | 31220 | g103313 | i0 | 80.935 | 31.608024691358 | 278 | 43 | 84 | 10 | 36 | 308 | 8901 | 9173 | PREDICTED: Littorina saxatilis cytoplasmic dynein 1 heavy chain 1-like (LOC138953643), transcript variant X2, mRNA | blastn | 10241 | 211 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Littorinimorpha | Littorinidae | Littorina | Littorina saxatilis | |
| 12942131 | 12942131 | PRJNA1074407_P_NODE_119571_length_288_cov_1.897674_g115733_i0 | PRJNA1074407 | 119571 | 288 | 1.897674 | 5.46530112 | Metazoa | 33208 | Mollusca | Mollusca | 96.7 | 7.54e-21 | NR | XP_013087830.2 | 6526 | g115733 | i0 | 86 | 18.5416666666667 | 50 | 7 | 52.1 | 0 | 288 | 139 | 275 | 324 | XP_013087830.2 2-oxoglutarate dehydrogenase complex component E1-like isoform X2 [Biomphalaria glabrata] | diamond | 5340 | 97.4 | 0.992813141683778 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Planorbidae | Biomphalaria | Biomphalaria glabrata | ||
| 15490992 | 15490992 | PRJNA1074407_P_NODE_115933_length_298_cov_1.466667_g112095_i0 | PRJNA1074407 | 115933 | 298 | 1.466667 | 4.37066766 | Bradybaena similaris | 145626 | Mollusca | Mollusca | 60.2 | 1.66e-4 | NTclustered | gi|2912991694|dbj|AP039596.1| | 145626 | g112095 | i0 | 92.857 | 7.7986577181208 | 42 | 2 | 14 | 1 | 15 | 55 | 45596136 | 45596177 | Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 15, sequence | blastn | 2324 | 60.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Stylommatophora | Camaenidae | Bradybaena | Bradybaena similaris | |
| 16767423 | 16767423 | PRJNA1074407_P_NODE_75214_length_459_cov_1.240933_g71379_i0 | PRJNA1074407 | 75214 | 459 | 1.240933 | 5.69588247 | Littorina saxatilis | 31220 | Mollusca | Mollusca | 182 | 5.44e-41 | NTclustered | gi|2868688207|ref|XM_070347684.1| | 31220 | g71379 | i0 | 88.158 | 25.0936819172113 | 152 | 18 | 33 | 0 | 3 | 154 | 677 | 828 | PREDICTED: Littorina saxatilis protein yippee-like 1 (LOC138975036), transcript variant X1, mRNA | blastn | 11518 | 182 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Littorinimorpha | Littorinidae | Littorina | Littorina saxatilis | |
| 18040993 | 18040993 | PRJNA1074407_P_NODE_28735_length_1082_cov_2.685828_g25748_i0 | PRJNA1074407 | 28735 | 1082 | 2.685828 | 29.06065896 | Mya arenaria | 6604 | Mollusca | Mollusca | 54.7 | 0.031 | NTclustered | gi|2427467042|ref|XM_052939866.1| | 6604 | g25748 | i0 | 100 | 0.0536044362292052 | 29 | 0 | 3 | 0 | 620 | 648 | 938 | 966 | PREDICTED: Mya arenaria cell division control protein 42 homolog (LOC128228518), transcript variant X1, mRNA | blastn | 58 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Bivalvia | Myida | Myidae | Mya | Mya arenaria | |
| 18041716 | 18041716 | PRJNA1074407_P_NODE_56775_length_602_cov_2.158790_g52974_i0 | PRJNA1074407 | 56775 | 602 | 2.15879 | 12.9959158 | Bradybaena similaris | 145626 | Mollusca | Mollusca | 56.5 | 0.005 | NTclustered | gi|2912987826|dbj|AP039592.1| | 145626 | g52974 | i0 | 97.059 | 0.0564784053156146 | 34 | 0 | 5 | 1 | 488 | 520 | 10695198 | 10695165 | Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 11, sequence | blastn | 34 | 56.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Stylommatophora | Camaenidae | Bradybaena | Bradybaena similaris | |
| 19314074 | 19314074 | PRJNA1074407_P_NODE_118416_length_291_cov_2.591743_g114578_i0 | PRJNA1074407 | 118416 | 291 | 2.591743 | 7.54197213 | Crassostrea virginica | 6565 | Mollusca | Mollusca | 75 | 5.75e-9 | NTclustered | gi|1242790991|ref|XM_022479981.1| | 6565 | g114578 | i0 | 81.053 | 0.326460481099656 | 95 | 17 | 32 | 1 | 197 | 290 | 659 | 565 | PREDICTED: Crassostrea virginica homeobox protein caupolican-like (LOC111132203), mRNA | blastn | 95 | 75 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Bivalvia | Ostreida | Ostreidae | Crassostrea | Crassostrea virginica | |
| 23140447 | 23140447 | PRJNA1074407_P_NODE_107459_length_323_cov_2.064000_g103621_i0 | PRJNA1074407 | 107459 | 323 | 2.064 | 6.66672 | Octopus bimaculoides | 37653 | Mollusca | Mollusca | 56.5 | 0.002 | NTclustered | gi|2427234852|ref|XM_052966633.1| | 37653 | g103621 | i0 | 90.698 | 0.532507739938081 | 43 | 3 | 13 | 1 | 172 | 214 | 8354 | 8313 | PREDICTED: Octopus bimaculoides semaphorin-1A (LOC106872300), transcript variant X4, mRNA | blastn | 172 | 56.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Cephalopoda | Octopoda | Octopodidae | Octopus | Octopus bimaculoides | |
| 23141152 | 23141152 | PRJNA1074407_P_NODE_145639_length_240_cov_1.449102_g141801_i0 | PRJNA1074407 | 145639 | 240 | 1.449102 | 3.4778448 | Ruditapes philippinarum | 129788 | Mollusca | Mollusca | 52.8 | 0.022 | NTclustered | gi|2616645869|ref|XM_060741898.1| | 129788 | g141801 | i0 | 100 | 0.116666666666667 | 28 | 0 | 12 | 0 | 181 | 208 | 3491 | 3464 | PREDICTED: Ruditapes philippinarum uncharacterized LOC132751680 (LOC132751680), mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Bivalvia | Venerida | Veneridae | Ruditapes | Ruditapes philippinarum | |
| 23142910 | 23142910 | PRJNA1074407_P_NODE_84239_length_412_cov_2.227139_g80403_i0 | PRJNA1074407 | 84239 | 412 | 2.227139 | 9.17581268 | Octopus bimaculoides | 37653 | Mollusca | Mollusca | 52.8 | 0.04 | NTclustered | gi|2427271833|ref|XM_014921945.2| | 37653 | g80403 | i0 | 100 | 0.0679611650485437 | 28 | 0 | 7 | 0 | 46 | 73 | 195 | 222 | PREDICTED: Octopus bimaculoides coiled-coil domain-containing protein 125 (LOC106874275), transcript variant X1, mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Cephalopoda | Octopoda | Octopodidae | Octopus | Octopus bimaculoides | |
| 24416461 | 24416461 | PRJNA1074407_P_NODE_79260_length_436_cov_9.195592_g75424_i0 | PRJNA1074407 | 79260 | 436 | 9.195592 | 40.09278112 | Mollusca environmental sample | 653389 | Mollusca | Mollusca | 329 | 1.74e-85 | NTclustered | gi|156254524|gb|EF528299.1| | 653389 | g75424 | i0 | 91.597 | 54.3394495412844 | 238 | 20 | 55 | 0 | 199 | 436 | 761 | 998 | Uncultured mollusc isolate XenLSU7 28S ribosomal RNA gene, partial sequence | blastn | 23692 | 329 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Mollusca environmental sample | |||||
| 27098984 | 27098984 | PRJNA1074407_P_NODE_113262_length_306_cov_0.978541_g109424_i0 | PRJNA1074407 | 113262 | 306 | 0.978541 | 2.99433546 | Lottia gigantea | 225164 | Mollusca | Mollusca | 69.7 | 2.6e-11 | NR | XP_009052976.1 | 225164 | g109424 | i0 | 66 | 3.12745098039216 | 50 | 17 | 49 | 0 | 5 | 154 | 697 | 746 | XP_009052976.1 hypothetical protein LOTGIDRAFT_227052 [Lottia gigantea] | diamond | 957 | 69.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Lottiidae | Lottia | Lottia gigantea | ||
| 27478206 | 27478206 | PRJNA1074407_P_NODE_146123_length_240_cov_0.910180_g142285_i0 | PRJNA1074407 | 146123 | 240 | 0.91018 | 2.184432 | Haliotis rubra | 36100 | Mollusca | Mollusca | 52 | 1.93e-5 | NR | XP_046573907.1 | 36100 | g142285 | i0 | 52.6 | 1.5125 | 57 | 27 | 71.3 | 0 | 29 | 199 | 22 | 78 | XP_046573907.1 toll-like receptor 4 [Haliotis rubra] | diamond | 363 | 52 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Lepetellida | Haliotidae | Haliotis | Haliotis rubra | |
| 27478214 | 27478214 | PRJNA1074407_P_NODE_43563_length_773_cov_6.861429_g39957_i0 | PRJNA1074407 | 43563 | 773 | 6.861429 | 53.03884617 | Magallana gigas | 29159 | Mollusca | Mollusca | 192 | 5.09e-58 | NR | XP_034312381.1 | 29159 | g39957 | i0 | 59 | 6.86934023285899 | 156 | 63 | 60.2 | 1 | 46 | 510 | 11 | 166 | XP_034312381.1 glutathione peroxidase-like isoform X4 [Magallana gigas] | diamond | 5310 | 192 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Bivalvia | Ostreida | Ostreidae | Magallana | Magallana gigas | |
| 28835855 | 28835855 | PRJNA1074407_P_NODE_110548_length_314_cov_1.116183_g106710_i0 | PRJNA1074407 | 110548 | 314 | 1.116183 | 3.50481462 | Haliotis asinina | 109174 | Mollusca | Mollusca | 74.7 | 5.31e-13 | NR | XP_067663404.1 | 109174 | g106710 | i0 | 50 | 4.31847133757962 | 84 | 40 | 80.3 | 1 | 6 | 257 | 1491 | 1572 | XP_067663404.1 transcriptional regulator ATRX homolog isoform X1 [Haliotis asinina] | diamond | 1356 | 74.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Lepetellida | Haliotidae | Haliotis | Haliotis asinina | |
| 28930691 | 28930691 | PRJNA1074407_P_NODE_138228_length_247_cov_0.873563_g134390_i0 | PRJNA1074407 | 138228 | 247 | 0.873563 | 2.15770061 | Dreissena polymorpha | 45954 | Mollusca | Mollusca | 57.8 | 1.97e-7 | NR | XP_052249385.1 | 45954 | g134390 | i0 | 50 | 1.71255060728745 | 48 | 24 | 58.3 | 0 | 243 | 100 | 467 | 514 | XP_052249385.1 dual specificity tyrosine-phosphorylation-regulated kinase 2-like [Dreissena polymorpha] | diamond | 423 | 57.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Bivalvia | Myida | Dreissenidae | Dreissena | Dreissena polymorpha | |
| 29206500 | 29206500 | PRJNA1074407_P_NODE_135609_length_249_cov_0.863636_g131771_i0 | PRJNA1074407 | 135609 | 249 | 0.863636 | 2.15045364 | Mollusca | 6447 | Mollusca | Mollusca | 58.5 | 1.02e-7 | NR | CAG5116547.1 | 100452 | g131771 | i0 | 56 | 3.79518072289157 | 50 | 19 | 56.6 | 1 | 241 | 101 | 97 | 146 | CAG5116547.1 unnamed protein product [Candidula unifasciata] | diamond | 945 | 58.9 | 0.99320882852292 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Stylommatophora | Geomitridae | Candidula | Candidula unifasciata | |
| 29561958 | 29561958 | PRJNA1074407_P_NODE_100550_length_346_cov_1.391941_g96712_i0 | PRJNA1074407 | 100550 | 346 | 1.391941 | 4.81611586 | Lymnaea stagnalis | 6523 | Mollusca | Mollusca | 44.3 | 0.0332 | NR | CAL1538401.1 | 6523 | g96712 | i0 | 35 | 0.893063583815029 | 103 | 54 | 80.6 | 2 | 282 | 4 | 252 | 351 | CAL1538401.1 unnamed protein product [Lymnaea stagnalis] | diamond | 309 | 44.3 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Lymnaeidae | Lymnaea | Lymnaea stagnalis | ||
| 30216790 | 30216790 | PRJNA1074407_P_NODE_143472_length_242_cov_1.171598_g139634_i0 | PRJNA1074407 | 143472 | 242 | 1.171598 | 2.83526716 | Metazoa | 33208 | Mollusca | Mollusca | 47.8 | 6.41e-4 | NR | XP_022308208.1 | 6565 | g139634 | i0 | 37.5 | 5.55371900826446 | 80 | 41 | 96.7 | 3 | 237 | 4 | 853 | 925 | XP_022308208.1 coatomer subunit alpha-like isoform X1 [Crassostrea virginica] | diamond | 1344 | 47.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Bivalvia | Ostreida | Ostreidae | Crassostrea | Crassostrea virginica | |
| 30320726 | 30320726 | PRJNA1074407_P_NODE_66172_length_518_cov_1.705618_g62346_i0 | PRJNA1074407 | 66172 | 518 | 1.705618 | 8.83510124 | Physella acuta | 109671 | Mollusca | Mollusca | 206 | 1.03e-60 | NR | XP_059178145.1 | 109671 | g62346 | i0 | 54.7 | 4.98069498069498 | 172 | 77 | 99.6 | 1 | 1 | 516 | 253 | 423 | XP_059178145.1 aarF domain-containing protein kinase 1-like [Physella acuta] | diamond | 2580 | 206 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Physidae | Physella | Physella acuta | ||
| 30564136 | 30564136 | PRJNA1074407_P_NODE_143233_length_242_cov_1.763314_g139395_i0 | PRJNA1074407 | 143233 | 242 | 1.763314 | 4.26721988 | Ostreidae | 6563 | Mollusca | Mollusca | 85.9 | 2.4e-17 | NR | XP_034299132.2 | 29159 | g139395 | i0 | 52.5 | 4.61157024793388 | 80 | 38 | 99.2 | 0 | 242 | 3 | 88 | 167 | XP_034299132.2 exosome complex exonuclease RRP44 [Magallana gigas] | diamond | 1116 | 86.7 | 0.990772779700115 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Bivalvia | Ostreida | Ostreidae | Magallana | Magallana gigas | |
| 30627464 | 30627464 | PRJNA1074407_P_NODE_113633_length_305_cov_0.982759_g109795_i0 | PRJNA1074407 | 113633 | 305 | 0.982759 | 2.99741495 | Metazoa | 33208 | Mollusca | Mollusca | 118 | 8.01e-30 | NR | XP_070180684.1 | 31220 | g109795 | i0 | 66.7 | 2.64590163934426 | 90 | 30 | 88.5 | 0 | 304 | 35 | 235 | 324 | XP_070180684.1 stress-induced-phosphoprotein 1-like isoform X2 [Littorina saxatilis] | diamond | 807 | 118 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Littorinimorpha | Littorinidae | Littorina | Littorina saxatilis | |
| 32366992 | 32366992 | PRJNA1074407_P_NODE_112599_length_308_cov_0.970213_g108761_i0 | PRJNA1074407 | 112599 | 308 | 0.970213 | 2.98825604 | Metazoa | 33208 | Mollusca | Mollusca | 108 | 5.07e-26 | NR | CAL1530741.1 | 6523 | g108761 | i0 | 57.4 | 2.97077922077922 | 101 | 42 | 98.4 | 1 | 3 | 305 | 104 | 203 | CAL1530741.1 unnamed protein product [Lymnaea stagnalis] | diamond | 915 | 109 | 0.990825688073395 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Gastropoda | Lymnaeidae | Lymnaea | Lymnaea stagnalis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;