RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1074407", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1074407 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15493543 15493543 PRJNA1074407_P_NODE_95373_length_365_cov_1.119863_g91536_i0 PRJNA1074407 95373 365 1.119863 4.08749995 Metazoa 33208 Hemichordata other_Eukaryota 182 2.33e-51   NR XP_070538054.1 63121 g91536 i0 71.9 6.9041095890411 121 34 99.5 0 363 1 126 246 XP_070538054.1 very long-chain specific acyl-CoA dehydrogenase, mitochondrial-like [Ptychodera flava] diamond 2520 183 0.994535519125683 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
32430180 32430180 PRJNA1074407_P_NODE_78919_length_438_cov_1.884932_g75083_i0 PRJNA1074407 78919 438 1.884932 8.25600216 Metazoa 33208 Hemichordata other_Eukaryota 70.9 2.95e-11   NR XP_070578908.1 63121 g75083 i0 42.2 4.8972602739726 116 67 79.5 0 436 89 98 213 XP_070578908.1 UBX domain-containing protein 1-like [Ptychodera flava] diamond 2145 71.2 0.995786516853933 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;