RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1074407", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1074407 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1465546 1465546 PRJNA1074407_P_NODE_9862_length_1950_cov_52.189132_g8129_i1 PRJNA1074407 9862 1950 52.189132 1017.688074 Patiria miniata 46514 Echinodermata other_Eukaryota 86.1 1.98e-11   NTclustered gi|1944940298|ref|XM_038190411.1| 46514 g8129 i1 93.103 0.304615384615385 58 4 5 0 1790 1847 4793 4850 PREDICTED: Patiria miniata nucleolar protein dao-5-like (LOC119720640), transcript variant X5, mRNA blastn 594 86.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
5293708 5293708 PRJNA1074407_P_NODE_9485_length_1983_cov_62.564398_g8129_i0 PRJNA1074407 9485 1983 62.564398 1240.65201234 Patiria miniata 46514 Echinodermata other_Eukaryota 86.1 2.02e-11   NTclustered gi|1944940298|ref|XM_038190411.1| 46514 g8129 i0 93.103 0.299546142208775 58 4 5 0 1823 1880 4793 4850 PREDICTED: Patiria miniata nucleolar protein dao-5-like (LOC119720640), transcript variant X5, mRNA blastn 594 86.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
28204208 28204208 PRJNA1074407_P_NODE_147906_length_237_cov_3.243902_g144068_i0 PRJNA1074407 147906 237 3.243902 7.68804774 Acanthaster planci 133434 Echinodermata other_Eukaryota 75.1 1.36e-13   NR XP_022103981.1 133434 g144068 i0 44.2 1.88607594936709 77 43 97.5 0 235 5 47 123 XP_022103981.1 dystroglycan-like [Acanthaster planci] diamond 447 75.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
29215017 29215017 PRJNA1074407_P_NODE_105169_length_331_cov_1.178295_g101331_i0 PRJNA1074407 105169 331 1.178295 3.90015645 Acanthaster planci 133434 Echinodermata other_Eukaryota 57.4 7.83e-7   NR XP_022088890.1 133434 g101331 i0 47.1 10.7129909365559 87 44 78.9 1 330 70 736 820 XP_022088890.1 low-density lipoprotein receptor-related protein 4-like [Acanthaster planci] diamond 3546 57.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;