RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1074407", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1074407 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1016390 1016390 PRJNA1074407_P_NODE_64841_length_528_cov_3.564835_g61015_i0 PRJNA1074407 64841 528 3.564835 18.8223288 Fungi 4751 Fungi Fungi 54.7 0.014   NTclustered gi|1069955856|ref|XM_018439391.1| 763407 g61015 i0 96.875 0.140151515151515 32 1 6 0 425 456 925 894 Phycomyces blakesleeanus NRRL 1555(-) helix-loop-helix DNA-binding domain-containing transcription factor mRNA blastn 74 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
30857264 30857264 PRJNA1074407_P_NODE_95154_length_366_cov_1.037543_g91317_i0 PRJNA1074407 95154 366 1.037543 3.79740738 Parasitella parasitica 35722 Fungi Fungi 105 1.49e-23   NR CEP10635.1 35722 g91317 i0 42.5 8.40163934426229 127 66 98.4 2 2 361 81 207 CEP10635.1 hypothetical protein [Parasitella parasitica] diamond 3075 105 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Parasitella Parasitella parasitica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;