contig_metadata
14 rows where bioproject = "PRJNA1074407", tax_kingdom = "Bacillati" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1463081 | 1463081 | PRJNA1074407_P_NODE_124582_length_275_cov_1.460396_g120744_i0 | PRJNA1074407 | 124582 | 275 | 1.460396 | 4.016089 | Ruminiclostridium papyrosolvens | 29362 | Bacteria | Bacteria | 424 | 4.6499999999999996e-114 | NTclustered | gi|2463005755|gb|CP119677.1| | 588581 | g120744 | i0 | 95.472 | 786.894545454545 | 265 | 12 | 96 | 0 | 1 | 265 | 508753 | 509017 | Ruminiclostridium papyrosolvens DSM 2782 chromosome, complete genome | blastn | 216396 | 424 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Ruminiclostridium | Ruminiclostridium papyrosolvens | ||
| 3566953 | 3566953 | PRJNA1074407_P_NODE_125763_length_272_cov_1.286432_g121925_i0 | PRJNA1074407 | 125763 | 272 | 1.286432 | 3.49909504 | Clostridium | 1485 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|848258874|gb|CP011803.1| | 536227 | g121925 | i0 | 96.774 | 0.216911764705882 | 31 | 1 | 11 | 0 | 47 | 77 | 259893 | 259923 | Clostridium carboxidivorans P7, complete genome | blastn | 59 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium carboxidivorans | ||
| 6119444 | 6119444 | PRJNA1074407_P_NODE_104245_length_334_cov_1.164751_g100407_i0 | PRJNA1074407 | 104245 | 334 | 1.164751 | 3.89026834 | Bacillati | 1783272 | Bacteria | Bacteria | 617 | 2.48e-172 | NTclustered | gi|2175030136|gb|CP071992.1| | 1282 | g100407 | i0 | 100 | 527.883233532934 | 334 | 0 | 100 | 0 | 1 | 334 | 789367 | 789034 | Staphylococcus epidermidis strain CBPA-ST-11003 chromosome, complete genome | blastn | 176313 | 617 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 6119653 | 6119653 | PRJNA1074407_P_NODE_75705_length_456_cov_1.425587_g71870_i0 | PRJNA1074407 | 75705 | 456 | 1.425587 | 6.50067672 | Streptococcus | 1301 | Bacteria | Bacteria | 843 | 0 | NTclustered | gi|1612126230|gb|CP028415.1| | 28037 | g71870 | i0 | 100 | 325 | 456 | 0 | 100 | 0 | 1 | 456 | 245558 | 245103 | Streptococcus mitis strain SK637 chromosome, complete genome | blastn | 148200 | 843 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 9117970 | 9117970 | PRJNA1074407_P_NODE_69548_length_494_cov_1.622328_g65716_i0 | PRJNA1074407 | 69548 | 494 | 1.622328 | 8.01430032 | root | 1 | Root_unresolved | Root_unresolved | 83.2 | 3.42e-16 | NR | WP_203200704.1 | 1307 | g65716 | i0 | 58.2 | 6.51012145748988 | 67 | 28 | 40.7 | 0 | 332 | 132 | 118 | 184 | WP_203200704.1 hypothetical protein, partial [Streptococcus suis] | diamond | 3216 | 84 | 0.990476190476191 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus suis | ||
| 10392211 | 10392211 | PRJNA1074407_P_NODE_148309_length_225_cov_2.375000_g144471_i0 | PRJNA1074407 | 148309 | 225 | 2.375 | 5.34375 | Bacillus cereus | 1396 | Bacteria | Bacteria | 405 | 1.33e-108 | NTclustered | gi|1783154430|gb|CP040340.1| | 1396 | g144471 | i0 | 99.111 | 101 | 225 | 2 | 100 | 0 | 1 | 225 | 4949262 | 4949038 | Bacillus cereus strain DLOU-Tangshan chromosome, complete genome | blastn | 22725 | 405 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus | ||
| 11667176 | 11667176 | PRJNA1074407_P_NODE_124770_length_275_cov_1.034653_g120932_i0 | PRJNA1074407 | 124770 | 275 | 1.034653 | 2.84529575 | Lactococcus petauri | 1940789 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|2257541798|gb|CP086595.1| | 1940789 | g120932 | i0 | 100 | 0.105454545454545 | 29 | 0 | 11 | 0 | 116 | 144 | 794808 | 794780 | Lactococcus petauri strain LG26 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Lactococcus petauri | ||
| 17594134 | 17594134 | PRJNA1074407_P_NODE_145994_length_240_cov_0.910180_g142156_i0 | PRJNA1074407 | 145994 | 240 | 0.91018 | 2.184432 | Leuconostoc | 1243 | Bacteria | Bacteria | 438 | 1.4199999999999995e-118 | NTclustered | gi|2410894178|gb|CP113947.1| | 33968 | g142156 | i0 | 99.583 | 338.004166666667 | 240 | 1 | 100 | 0 | 1 | 240 | 21028 | 20789 | Leuconostoc pseudomesenteroides strain L64 chromosome, complete genome | blastn | 81121 | 438 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Leuconostoc | Leuconostoc pseudomesenteroides | ||
| 17594253 | 17594253 | PRJNA1074407_P_NODE_71754_length_479_cov_2.467980_g67921_i0 | PRJNA1074407 | 71754 | 479 | 2.46798 | 11.8216242 | Streptococcus | 1301 | Bacteria | Bacteria | 845 | 0 | NTclustered | gi|1247204361|gb|CP023507.1| | 1303 | g67921 | i0 | 98.542 | 335.112734864301 | 480 | 3 | 100 | 2 | 1 | 479 | 26780 | 26304 | Streptococcus oralis strain FDAARGOS_367 chromosome, complete genome | blastn | 160519 | 850 | 0.994117647058824 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 27035795 | 27035795 | PRJNA1074407_P_NODE_137222_length_247_cov_3.218391_g133384_i0 | PRJNA1074407 | 137222 | 247 | 3.218391 | 7.94942577 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 41.2 | 0.0427 | NR | MBE6810904.1 | 2485925 | g133384 | i0 | 45 | 0.48582995951417 | 40 | 18 | 48.6 | 1 | 127 | 8 | 19 | 54 | MBE6810904.1 zinc ribbon domain-containing protein [Oscillospiraceae bacterium] | diamond | 120 | 41.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 28204196 | 28204196 | PRJNA1074407_P_NODE_111626_length_310_cov_4.430380_g107788_i0 | PRJNA1074407 | 111626 | 310 | 4.43038 | 13.734178 | Veillonella sp. | 1926307 | Bacteria | Bacteria | 160 | 1.28e-48 | NR | WP_366512514.1 | 1926307 | g107788 | i0 | 73.5 | 1.9741935483871 | 102 | 27 | 98.7 | 0 | 309 | 4 | 4 | 105 | WP_366512514.1 hypothetical protein [Veillonella sp.] | diamond | 612 | 160 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella sp. | ||
| 29941242 | 29941242 | PRJNA1074407_P_NODE_71351_length_482_cov_1.633252_g67519_i0 | PRJNA1074407 | 71351 | 482 | 1.633252 | 7.87227464 | Erysipelatoclostridium sp. An173 | 1965571 | Bacteria | Bacteria | 46.2 | 0.0262 | NR | WP_087370850.1 | 1965571 | g67519 | i0 | 26.4 | 0.871369294605809 | 140 | 92 | 80.9 | 4 | 422 | 33 | 488 | 626 | WP_087370850.1 discoidin domain-containing protein [Erysipelatoclostridium sp. An173] | diamond | 420 | 46.2 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Coprobacillaceae | Thomasclavelia | Erysipelatoclostridium sp. An173 | ||
| 31331309 | 31331309 | PRJNA1074407_P_NODE_55196_length_619_cov_1.789377_g51404_i0 | PRJNA1074407 | 55196 | 619 | 1.789377 | 11.07624363 | Lactobacillales bacterium | 1993866 | Bacteria | Bacteria | 46.2 | 0.0169 | NR | MBE6159497.1 | 1993866 | g51404 | i0 | 29.8 | 0.455573505654281 | 94 | 53 | 39.3 | 2 | 386 | 144 | 49 | 142 | MBE6159497.1 hypothetical protein [Lactobacillales bacterium] | diamond | 282 | 46.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillales bacterium | ||||
| 32690971 | 32690971 | PRJNA1074407_P_NODE_141420_length_244_cov_0.888889_g137582_i0 | PRJNA1074407 | 141420 | 244 | 0.888889 | 2.16888916 | Clostridiales bacterium | 1898207 | Bacteria | Bacteria | 119 | 6.79e-30 | NR | NTV77889.1 | 1898207 | g137582 | i0 | 63 | 1.99180327868852 | 81 | 30 | 99.6 | 0 | 2 | 244 | 51 | 131 | NTV77889.1 hypothetical protein [Clostridiales bacterium] | diamond | 486 | 119 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;