RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1074407" and tax_clade = "Stenosarchaea group"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA1074407 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1465418 1465418 PRJNA1074407_P_NODE_92022_length_378_cov_1.495082_g88185_i0 PRJNA1074407 92022 378 1.495082 5.65140996 Methanolacinia petrolearia 54120 Archaea Archaea 52.8 0.036   NTclustered gi|307155401|gb|CP002117.1| 679926 g88185 i0 100 0.0740740740740741 28 0 7 0 183 210 1987373 1987346 Methanolacinia petrolearia DSM 11571 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanolacinia Methanolacinia petrolearia
29561967 29561967 PRJNA1074407_P_NODE_119970_length_287_cov_1.705607_g116132_i0 PRJNA1074407 119970 287 1.705607 4.89509209 Halovenus rubra 869890 Archaea Archaea 44.3 0.0166   NR WP_267637460.1 869890 g116132 i0 29.9 0.909407665505226 87 55 90.9 1 267 7 222 302 WP_267637460.1 hypothetical protein [Halovenus rubra] diamond 261 44.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halovenus Halovenus rubra

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;