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contig_metadata

10 rows where bioproject = "PRJNA1073712" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 10 ✖

bioproject 1

  • PRJNA1073712 · 10 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2738215 2738215 PRJNA1073712_P_NODE_5563_length_320_cov_1.558704_g5480_i0 PRJNA1073712 5563 320 1.558704 4.9878528 archaeon 1906665 Archaea Archaea 194 6.51e-60   NR RYG64625.1 1906665 g5480 i0 88.5 0.975 104 12 97.5 0 7 318 157 260 RYG64625.1 MAG: 50S ribosomal protein L3, partial [archaeon] diamond 312 194 1 Archaea               archaeon
18039303 18039303 PRJNA1073712_P_NODE_5695_length_318_cov_0.938776_g5612_i0 PRJNA1073712 5695 318 0.938776 2.98530768 archaeon 1906665 Archaea Archaea 193 1.83e-60   NR MCQ2821492.1 1906665 g5612 i0 84.9 4 106 16 100 0 318 1 2 107 MCQ2821492.1 50S ribosomal protein L15e [archaeon] diamond 1272 193 1 Archaea               archaeon
27067337 27067337 PRJNA1073712_P_NODE_7422_length_289_cov_1.175926_g7339_i0 PRJNA1073712 7422 289 1.175926 3.39842614 archaeon 1906665 Archaea Archaea 74.7 4.47e-15   NR RYH00022.1 1906665 g7339 i0 58.2 0.695501730103806 67 27 69.6 1 87 287 1 66 RYH00022.1 MAG: hypothetical protein EON65_49750 [archaeon] diamond 201 74.7 1 Archaea               archaeon
28015116 28015116 PRJNA1073712_P_NODE_14205_length_246_cov_0.890173_g14122_i0 PRJNA1073712 14205 246 0.890173 2.18982558 archaeon 1906665 Archaea Archaea 46.2 0.00233   NR MDP2434768.1 1906665 g14122 i0 38.5 1.74390243902439 65 39 79.3 1 197 3 1119 1182 MDP2434768.1 hypothetical protein [archaeon] diamond 429 46.2 1 Archaea               archaeon
28330628 28330628 PRJNA1073712_P_NODE_10366_length_258_cov_1.664865_g10283_i0 PRJNA1073712 10366 258 1.664865 4.2953517 Saccharolobus caldissimus 1702097 Archaea Archaea 50.4 2.32e-5   NR WP_229570762.1 1702097 g10283 i0 38.3 0.941860465116279 81 48 94.2 2 243 1 32 110 WP_229570762.1 universal stress protein [Saccharolobus caldissimus] diamond 243 50.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Saccharolobus Saccharolobus caldissimus
28858875 28858875 PRJNA1073712_P_NODE_15748_length_243_cov_0.905882_g15665_i0 PRJNA1073712 15748 243 0.905882 2.20129326 root 1 Root_unresolved Root_unresolved 44.7 0.00735   NR HKS59266.1 1906666 g15665 i0 54.8 1.51851851851852 31 14 38.3 0 206 114 1 31 HKS59266.1 zinc ribbon domain-containing protein [Thermoplasmata archaeon] diamond 369 44.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29215011 29215011 PRJNA1073712_P_NODE_13309_length_247_cov_0.885057_g13226_i0 PRJNA1073712 13309 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 130 2.54e-36   NR RYH19594.1 1906665 g13226 i0 80 0.910931174089069 75 15 91.1 0 227 3 50 124 RYH19594.1 MAG: hypothetical protein EON65_25855 [archaeon] diamond 225 130 1 Archaea               archaeon
31015262 31015262 PRJNA1073712_P_NODE_16135_length_242_cov_0.911243_g16052_i0 PRJNA1073712 16135 242 0.911243 2.20520806 archaeon 1906665 Archaea Archaea 72.8 3.97e-13   NR RYH28511.1 1906665 g16052 i0 67.2 0.71900826446281 58 17 71.9 1 176 3 1 56 RYH28511.1 MAG: hypothetical protein EON65_11905 [archaeon] diamond 174 72.8 1 Archaea               archaeon
31553019 31553019 PRJNA1073712_P_NODE_2056_length_448_cov_1.434667_g1973_i0 PRJNA1073712 2056 448 1.434667 6.42730816 archaeon 1906665 Archaea Archaea 189 2.2099999999999997e-56   NR RYH04926.1 1906665 g1973 i0 80.5 0.790178571428571 118 23 79 0 95 448 1 118 RYH04926.1 MAG: 50S ribosomal protein L10, partial [archaeon] diamond 354 189 1 Archaea               archaeon
32438850 32438850 PRJNA1073712_P_NODE_15259_length_244_cov_0.900585_g15176_i0 PRJNA1073712 15259 244 0.900585 2.1974274 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 52 2.88e-6   NR MAG64035.1 2026803 g15176 i0 71.8 0.479508196721311 39 10 46.7 1 191 78 5 43 MAG64035.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 117 52 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;