RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1073712", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1073712 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5290380 5290380 PRJNA1073712_P_NODE_13865_length_246_cov_0.890173_g13782_i0 PRJNA1073712 13865 246 0.890173 2.18982558 Aparavirus vallesi 3048319 Viruses Viruses 405 1.48e-108   NTclustered gi|2701496700|gb|PP104795.1| 294369 g13782 i0 96.341 2.97967479674797 246 9 100 0 1 246 7609 7364 MAG: Solenopsis invicta virus 1 isolate GD-2022ANT6 genomic sequence blastn 733 405 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus vallesi
14216311 14216311 PRJNA1073712_P_NODE_5892_length_314_cov_1.278008_g5809_i0 PRJNA1073712 5892 314 1.278008 4.01294512 Periplaneta americana dicistro-like virus 3032225 Viruses Viruses 492 1.46e-134   NTclustered gi|2754804027|tpg|BK063169.1| 3032225 g5809 i0 94.904 1 314 16 100 0 1 314 4208 4521 TPA_asm: Periplaneta americana dicistro-like virus hypothetical protein gene, partial cds blastn 314 492 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Periplaneta americana dicistro-like virus
20588682 20588682 PRJNA1073712_P_NODE_9697_length_265_cov_1.239583_g9614_i0 PRJNA1073712 9697 265 1.239583 3.28489495 Shenzhen dicistro-like virus 2789378 Viruses Viruses 252 2.22e-62   NTclustered gi|1935607040|gb|MT747995.1| 2789378 g9614 i0 83.774 2.9811320754717 265 43 100 0 1 265 2373 2109 Shenzhen dicistro-like virus strain USAdp-3 polyprotein gene, complete cds blastn 790 252 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;