RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1073712" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1073712 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14216333 14216333 PRJNA1073712_P_NODE_8152_length_281_cov_1.062500_g8069_i0 PRJNA1073712 8152 281 1.0625 2.985625 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|1270517201|ref|XM_720130.2| 5861 g8069 i0 100 0.099644128113879 28 0 10 0 114 141 339 312 Plasmodium yoelii conserved Plasmodium protein, unknown function (PY17X_0107800), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
19313320 19313320 PRJNA1073712_P_NODE_17016_length_241_cov_0.916667_g16933_i0 PRJNA1073712 17016 241 0.916667 2.20916747 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 128 1.24e-36   NR XP_013436144.1 51315 g16933 i0 75 18.3983402489627 80 20 99.6 0 241 2 14 93 XP_013436144.1 60S ribosomal protein L37, putative [Eimeria necatrix] diamond 4434 129 0.992248062015504 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
29941215 29941215 PRJNA1073712_P_NODE_15911_length_243_cov_0.905882_g15828_i0 PRJNA1073712 15911 243 0.905882 2.20129326 Hepatocystis sp. ex Piliocolobus tephrosceles 2600580 SAR_Eukaryotes SAR_Eukaryotes 99.4 5.0099999999999994e-24   NR VWU50042.1 2600580 g15828 i0 55.4 1.02469135802469 83 34 98.8 2 4 243 3 85 VWU50042.1 enolase, putative, partial [Hepatocystis sp. ex Piliocolobus tephrosceles] diamond 249 99.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Hepatocystis Hepatocystis sp. ex Piliocolobus tephrosceles

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;