RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1073712" and tax_kingdom = "Thermotogati"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 4 ✖

bioproject 1

  • PRJNA1073712 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4844310 4844310 PRJNA1073712_P_NODE_7744_length_285_cov_1.429245_g7661_i0 PRJNA1073712 7744 285 1.429245 4.07334825 Deinococcus 1298 Bacteria Bacteria 521 1.6699999999999996e-143   NTclustered gi|2706837832|gb|CP149782.1| 3112952 g7661 i0 99.649 2 285 1 100 0 1 285 2542383 2542099 Deinococcus sp. VB142 chromosome 1, complete sequence blastn 570 521 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. VB142
9944403 9944403 PRJNA1073712_P_NODE_7588_length_287_cov_1.355140_g7505_i0 PRJNA1073712 7588 287 1.35514 3.8892518 Deinococcus 1298 Bacteria Bacteria 531 2.799999999999999e-146   NTclustered gi|1435316362|gb|CP031158.1| 980427 g7505 i0 100 457.696864111498 287 0 100 0 1 287 2147822 2148108 Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome blastn 131359 531 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus wulumuqiensis
30469873 30469873 PRJNA1073712_P_NODE_14733_length_245_cov_0.895349_g14650_i0 PRJNA1073712 14733 245 0.895349 2.19360505 Bacteria 2 Bacteria Bacteria 73.9 7.19e-14   NR WP_121957087.1 1434328 g14650 i0 47.4 6.64897959183673 76 37 89.4 1 242 24 76 151 WP_121957087.1 adenylate kinase [Petrotoga sp. 9PWA.NaAc.5.4] diamond 1629 73.9 1 Bacteria   Thermotogati Thermotogota Thermotogae Petrotogales Petrotogaceae Petrotoga Petrotoga sp. 9PWA.NaAc.5.4
32249095 32249095 PRJNA1073712_P_NODE_17018_length_241_cov_0.916667_g16935_i0 PRJNA1073712 17018 241 0.916667 2.20916747 Deinococcus fonticola 2528713 Bacteria Bacteria 150 1.1499999999999999e-42   NR WP_135230581.1 2528713 g16935 i0 97.5 0.983402489626556 79 2 98.3 0 239 3 86 164 WP_135230581.1 hypothetical protein [Deinococcus fonticola] diamond 237 150 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus fonticola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;