RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA1073712", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 9 ✖

tax_kingdom 1

  • Metazoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA1073712 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9115231 9115231 PRJNA1073712_P_NODE_1648_length_487_cov_1.468599_g1565_i0 PRJNA1073712 1648 487 1.468599 7.15207713 Yoldiella inconspicua 1069093 Mollusca Mollusca 333 1.51e-86   NTclustered gi|343952731|gb|JF410984.1| 1069093 g1565 i0 84.058 72.870636550308 345 55 71 0 9 353 394 50 Yoldiella inconspicua beta tubulin (BTUB) gene, partial cds blastn 35488 333 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Nuculanida sp. Yoldiidae Yoldiella Yoldiella inconspicua
23139970 23139970 PRJNA1073712_P_NODE_8319_length_279_cov_1.252427_g8236_i0 PRJNA1073712 8319 279 1.252427 3.49427133 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.007   NTclustered gi|2912986657|dbj|AP039591.1| 145626 g8236 i0 94.286 0.125448028673835 35 2 13 0 228 262 13048294 13048260 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 10, sequence blastn 35 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
27469840 27469840 PRJNA1073712_P_NODE_10383_length_258_cov_1.524324_g10300_i0 PRJNA1073712 10383 258 1.524324 3.93275592 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 112 3.09e-29   NR XP_050415293.1 6465 g10300 i0 61.6 9.81395348837209 86 33 100 0 1 258 19 104 XP_050415293.1 60S ribosomal protein L21 [Patella vulgata] diamond 2532 113 0.991150442477876 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
27699559 27699559 PRJNA1073712_P_NODE_15384_length_244_cov_0.865497_g15301_i0 PRJNA1073712 15384 244 0.865497 2.11181268 Magallana gigas 29159 Mollusca Mollusca 72 1.86e-12   NR XP_011433755.3 29159 g15301 i0 45.5 4.24180327868852 66 36 81.1 0 1 198 342 407 XP_011433755.3 uncharacterized protein [Magallana gigas] diamond 1035 72 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
28701250 28701250 PRJNA1073712_P_NODE_15227_length_244_cov_0.900585_g15144_i0 PRJNA1073712 15227 244 0.900585 2.1974274 Bivalvia 6544 Mollusca Mollusca 109 3.71e-28   NR XP_045177423.1 6596 g15144 i0 67.1 10.266393442623 76 24 92.2 1 1 225 23 98 XP_045177423.1 40S ribosomal protein S10-like isoform X2 [Mercenaria mercenaria] diamond 2505 110 0.990909090909091 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
29647942 29647942 PRJNA1073712_P_NODE_13750_length_246_cov_1.375723_g13667_i0 PRJNA1073712 13750 246 1.375723 3.38427858 Metazoa 33208 Mollusca Mollusca 87.8 5.54e-18   NR XP_059163192.1 109671 g13667 i0 46.8 12.7926829268293 77 41 93.9 0 1 231 1012 1088 XP_059163192.1 symplekin-like [Physella acuta] diamond 3147 87.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
30690737 30690737 PRJNA1073712_P_NODE_11233_length_251_cov_0.865169_g11150_i0 PRJNA1073712 11233 251 0.865169 2.17157419 Metazoa 33208 Mollusca Mollusca 62.8 3.48e-9   NR XP_052826859.1 37653 g11150 i0 34.9 6.94422310756972 83 47 99.2 3 1 249 252 327 XP_052826859.1 tRNA (guanine(6)-N2)-methyltransferase THUMP3 [Octopus bimaculoides] diamond 1743 63.2 0.993670886075949 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
31259637 31259637 PRJNA1073712_P_NODE_3535_length_374_cov_1.684385_g3452_i0 PRJNA1073712 3535 374 1.684385 6.2995999 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 82 2.91e-15   NR KAH9518662.1 55810 g3452 i0 46.5 3.51336898395722 99 52 78.6 1 296 3 7 105 KAH9518662.1 Eukaryotic translation initiation factor 3 subunit C [Bulinus truncatus] diamond 1314 82 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Bulinus Bulinus truncatus
32153876 32153876 PRJNA1073712_P_NODE_2678_length_409_cov_1.592262_g2595_i0 PRJNA1073712 2678 409 1.592262 6.51235158 Mizuhopecten yessoensis 6573 Mollusca Mollusca 78.6 2.7e-14   NR OWF56002.1 6573 g2595 i0 34.2 4.19559902200489 152 71 93.9 5 406 23 25 171 OWF56002.1 Muscle LIM protein Mlp84B [Mizuhopecten yessoensis] diamond 1716 78.6 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;