RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1073712", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1073712 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30983851 30983851 PRJNA1073712_P_NODE_15694_length_243_cov_0.905882_g15611_i0 PRJNA1073712 15694 243 0.905882 2.20129326 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 50.8 5.08e-5   NR XP_006811822.1 10224 g15611 i0 29 0.765432098765432 62 44 76.5 0 199 14 2 63 XP_006811822.1 PREDICTED: formin-binding protein 1 homolog [Saccoglossus kowalevskii] diamond 186 50.8 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
31837248 31837248 PRJNA1073712_P_NODE_677_length_694_cov_2.354267_g600_i0 PRJNA1073712 677 694 2.354267 16.33861298 Ptychodera flava 63121 Hemichordata other_Eukaryota 50.1 0.00495   NR XP_070532926.1 63121 g600 i0 48.6 0.380403458213256 37 19 16 0 524 634 774 810 XP_070532926.1 uncharacterized protein [Ptychodera flava] diamond 264 50.1 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;