RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1073712", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1073712 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11666273 11666273 PRJNA1073712_P_NODE_2470_length_420_cov_5.850144_g2387_i0 PRJNA1073712 2470 420 5.850144 24.5706048 Microconidiobolus nodosus 1167817 Fungi Fungi 141 8.39e-29   NTclustered gi|1393564599|ref|NG_058827.1| 1167817 g2387 i0 88.793 29.747619047619 116 12 28 1 11 126 357 243 Microconidiobolus nodosus ATCC 16577 28S rRNA gene, partial sequence; from TYPE material blastn 12494 141 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Microconidiobolus Microconidiobolus nodosus
28448731 28448731 PRJNA1073712_P_NODE_2566_length_415_cov_1.187135_g2483_i0 PRJNA1073712 2566 415 1.187135 4.92661025 Coemansia 4863 Fungi Fungi 94.4 2.22e-19   NR KAJ2847645.1 147472 g2483 i0 34.1 12.7228915662651 135 89 97.6 0 413 9 594 728 KAJ2847645.1 dynein heavy chain, partial [Coemansia erecta] diamond 5280 94.7 0.996832101372756 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia erecta
31299683 31299683 PRJNA1073712_P_NODE_12935_length_248_cov_0.880000_g12852_i0 PRJNA1073712 12935 248 0.88 2.1824 Thamnocephalis sphaerospora 78915 Fungi Fungi 89 9.63e-21   NR RKP08967.1 78915 g12852 i0 83.9 2.08064516129032 56 9 67.7 0 169 2 5 60 RKP08967.1 60S ribosomal protein L30-like protein [Thamnocephalis sphaerospora] diamond 516 89 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Sigmoideomycetaceae Thamnocephalis Thamnocephalis sphaerospora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;