RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1073712", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1073712 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5290347 5290347 PRJNA1073712_P_NODE_11265_length_251_cov_0.865169_g11182_i0 PRJNA1073712 11265 251 0.865169 2.17157419 Mycoplasma yeatsii 51365 Bacteria Bacteria 459 1.1499999999999996e-124   NTclustered gi|756767228|gb|CP007520.1| 743967 g11182 i0 99.602 171.573705179283 251 1 100 0 1 251 806836 806586 Mycoplasma yeatsii GM274B blastn 43065 459 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma yeatsii
32627965 32627965 PRJNA1073712_P_NODE_740_length_671_cov_1.677258_g661_i0 PRJNA1073712 740 671 1.677258 11.25440118 Mycoplasmopsis anatis 171279 Bacteria Bacteria 105 1.22e-24   NR MBW0597145.1 171279 g661 i0 60.8 0.961251862891207 97 38 43.4 0 42 332 62 158 MBW0597145.1 hypothetical protein [Mycoplasmopsis anatis] diamond 645 105 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis Mycoplasmopsis anatis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;