contig_metadata
10 rows where bioproject = "PRJNA1073712", tax_clade = "Sar" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4013974 | 4013974 | PRJNA1073712_P_NODE_11544_length_250_cov_2.033898_g11461_i0 | PRJNA1073712 | 11544 | 250 | 2.033898 | 5.084745 | Albugo laibachii | 653948 | SAR_Eukaryotes | SAR_Eukaryotes | 462 | 8.83e-126 | NTclustered | gi|325195820|emb|FR826611.1| | 890382 | g11461 | i0 | 100 | 21.136 | 250 | 0 | 100 | 0 | 1 | 250 | 278 | 29 | Albugo laibachii Nc14, genomic contig CONTIG_3778_NC14_v4_313_8 | blastn | 5284 | 462 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 6565526 | 6565526 | PRJNA1073712_P_NODE_12726_length_248_cov_0.880000_g12643_i0 | PRJNA1073712 | 12726 | 248 | 0.88 | 2.1824 | Phytophthora nicotianae | 4792 | SAR_Eukaryotes | SAR_Eukaryotes | 215 | 2.7e-51 | NTclustered | gi|675199240|ref|XM_008910257.1| | 761204 | g12643 | i0 | 82.661 | 89.8145161290323 | 248 | 37 | 100 | 3 | 1 | 248 | 785 | 1026 | Phytophthora parasitica INRA-310 ATP synthase subunit beta, mitochondrial mRNA | blastn | 22274 | 215 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora nicotianae | ||
| 18039332 | 18039332 | PRJNA1073712_P_NODE_9355_length_268_cov_1.553846_g9272_i0 | PRJNA1073712 | 9355 | 268 | 1.553846 | 4.16430728 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 228 | 3.8e-55 | NTclustered | gi|673016107|ref|XM_008863793.1| | 157072 | g9272 | i0 | 82.593 | 8.63805970149254 | 270 | 35 | 96 | 6 | 1 | 258 | 340 | 71 | Aphanomyces invadans hypothetical protein partial mRNA | blastn | 2315 | 228 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 27280269 | 27280269 | PRJNA1073712_P_NODE_16743_length_241_cov_0.916667_g16660_i0 | PRJNA1073712 | 16743 | 241 | 0.916667 | 2.20916747 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 71.6 | 2.35e-12 | NR | CCI44919.1 | 65357 | g16660 | i0 | 47.1 | 5.81327800829875 | 68 | 36 | 84.6 | 0 | 239 | 36 | 682 | 749 | CCI44919.1 unnamed protein product [Albugo candida] | diamond | 1401 | 72 | 0.994444444444444 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo candida | ||
| 28480128 | 28480128 | PRJNA1073712_P_NODE_5486_length_322_cov_0.923695_g5403_i0 | PRJNA1073712 | 5486 | 322 | 0.923695 | 2.9742979 | Peronosporomycetes | 3418804 | SAR_Eukaryotes | SAR_Eukaryotes | 77.8 | 4.55e-14 | NR | GLE08717.1 | 114742 | g5403 | i0 | 53.2 | 2.32919254658385 | 62 | 29 | 57.8 | 0 | 318 | 133 | 182 | 243 | GLE08717.1 hypothetical protein PINS_up020080 [Pythium insidiosum] | diamond | 750 | 77.8 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium insidiosum | ||
| 28772654 | 28772654 | PRJNA1073712_P_NODE_16507_length_242_cov_0.875740_g16424_i0 | PRJNA1073712 | 16507 | 242 | 0.87574 | 2.1192908 | Lagenidium giganteum | 4803 | SAR_Eukaryotes | SAR_Eukaryotes | 105 | 1.4699999999999999e-24 | NR | DAZ93390.1 | 4803 | g16424 | i0 | 65.8 | 0.942148760330578 | 76 | 26 | 94.2 | 0 | 3 | 230 | 5 | 80 | DAZ93390.1 TPA: hypothetical protein N0F65_012447 [Lagenidium giganteum] | diamond | 228 | 105 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Lagenidium | Lagenidium giganteum | ||
| 29467023 | 29467023 | PRJNA1073712_P_NODE_14450_length_245_cov_0.895349_g14367_i0 | PRJNA1073712 | 14450 | 245 | 0.895349 | 2.19360505 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 58.5 | 7.8e-9 | NR | KAH9147500.1 | 100861 | g14367 | i0 | 55.6 | 4.37142857142857 | 45 | 20 | 55.1 | 0 | 90 | 224 | 29 | 73 | KAH9147500.1 hypothetical protein AeRB84_008913, partial [Aphanomyces euteiches] | diamond | 1071 | 58.5 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 29688059 | 29688059 | PRJNA1073712_P_NODE_6950_length_296_cov_1.376682_g6867_i0 | PRJNA1073712 | 6950 | 296 | 1.376682 | 4.07497872 | Globisporangium splendens | 82926 | SAR_Eukaryotes | SAR_Eukaryotes | 124 | 5.16e-32 | NR | KAF1325827.1 | 82926 | g6867 | i0 | 60.2 | 2.94932432432432 | 98 | 39 | 99.3 | 0 | 3 | 296 | 100 | 197 | KAF1325827.1 60s acidic ribosomal protein p0, partial [Globisporangium splendens] | diamond | 873 | 124 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | Globisporangium splendens | ||
| 30225330 | 30225330 | PRJNA1073712_P_NODE_10112_length_261_cov_1.292553_g10029_i0 | PRJNA1073712 | 10112 | 261 | 1.292553 | 3.37356333 | [Pythium] brassicae (nom. inval.) | 1485010 | SAR_Eukaryotes | SAR_Eukaryotes | 119 | 1.43e-32 | NR | TYZ67485.1 | 1485010 | g10029 | i0 | 64.6 | 5.6551724137931 | 82 | 29 | 94.3 | 0 | 251 | 6 | 1 | 82 | TYZ67485.1 hypothetical protein PybrP1_008862 [[Pythium] brassicae (nom. inval.)] | diamond | 1476 | 119 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | [Pythium] brassicae (nom. inval.) | ||
| 32533722 | 32533722 | PRJNA1073712_P_NODE_16499_length_242_cov_0.899408_g16416_i0 | PRJNA1073712 | 16499 | 242 | 0.899408 | 2.17656736 | Phytophthora palmivora | 4796 | SAR_Eukaryotes | SAR_Eukaryotes | 99.8 | 1.83e-22 | NR | POM57954.1 | 4796 | g16416 | i0 | 63.8 | 3.96694214876033 | 80 | 4 | 99.2 | 1 | 242 | 3 | 171 | 225 | POM57954.1 Histone acetyltransferase ESA1 [Phytophthora palmivora] | diamond | 960 | 99.8 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora palmivora |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;