RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1073712", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 2

tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA1073712 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31299684 31299684 PRJNA1073712_P_NODE_17255_length_231_cov_2.322785_g17172_i0 PRJNA1073712 17255 231 2.322785 5.36563335 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 57 2.86e-7   NR XP_068361496.1 1144522 g17172 i0 63.4 0.532467532467532 41 15 53.2 0 180 58 169 209 XP_068361496.1 NLI interacting factor-like phosphatase family protein [Tritrichomonas foetus] diamond 123 57 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31616013 31616013 PRJNA1073712_P_NODE_16436_length_242_cov_0.911243_g16353_i0 PRJNA1073712 16436 242 0.911243 2.20520806 Hexamita inflata 28002 Fornicata other_Eukaryota 57.8 1.83e-7   NR CAK8766665.1 28002 g16353 i0 42.3 3.55785123966942 78 42 96.7 2 3 236 508 582 CAK8766665.1 HINF_057233 [Hexamita inflata] diamond 861 57.8 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;