RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1073712", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1073712 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29025660 29025660 PRJNA1073712_P_NODE_13828_length_246_cov_0.890173_g13745_i0 PRJNA1073712 13828 246 0.890173 2.18982558 Chitinispirillaceae bacterium 2813024 Bacteria Bacteria 43.1 0.0278   NR MBN2188631.1 2813024 g13745 i0 39.5 0.524390243902439 43 21 46.3 1 9 122 281 323 MBN2188631.1 T9SS type A sorting domain-containing protein [Chitinispirillaceae bacterium] diamond 129 43.1 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinispirillia Chitinispirillales Chitinispirillaceae   Chitinispirillaceae bacterium
30446729 30446729 PRJNA1073712_P_NODE_11893_length_250_cov_0.870056_g11810_i0 PRJNA1073712 11893 250 0.870056 2.17514 Fibrobacteria bacterium 2725311 Bacteria Bacteria 43.1 0.029   NR MCB9496227.1 2725311 g11810 i0 34.4 0.768 64 39 76.8 1 42 233 312 372 MCB9496227.1 ABC-F family ATP-binding cassette domain-containing protein [Fibrobacteria bacterium] diamond 192 43.1 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;