contig_metadata
16 rows where bioproject = "PRJNA1073183", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6565179 | 6565179 | PRJNA1073183_P_NODE_23546_length_269_cov_1.178571_g23451_i0 | PRJNA1073183 | 23546 | 269 | 1.178571 | 3.17035599 | Archangium sp. | 1872627 | Bacteria | Bacteria | 121 | 3.06e-30 | NR | HEY0880548.1 | 1872627 | g23451 | i0 | 65.9 | 13.7620817843866 | 88 | 30 | 98.1 | 0 | 267 | 4 | 115 | 202 | HEY0880548.1 SDR family NAD(P)-dependent oxidoreductase [Archangium sp.] | diamond | 3702 | 121 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. | ||
| 15489712 | 15489712 | PRJNA1073183_P_NODE_15793_length_328_cov_2.709804_g15698_i0 | PRJNA1073183 | 15793 | 328 | 2.709804 | 8.88815712 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 183 | 9.300000000000001e-57 | NR | MEM9488366.1 | 2818507 | g15698 | i0 | 90.4 | 8.5609756097561 | 94 | 9 | 86 | 0 | 46 | 327 | 9 | 102 | MEM9488366.1 peptidylprolyl isomerase [Myxococcota bacterium] | diamond | 2808 | 183 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 27659357 | 27659357 | PRJNA1073183_P_NODE_28584_length_248_cov_1.760000_g28489_i0 | PRJNA1073183 | 28584 | 248 | 1.76 | 4.3648 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 43.5 | 0.0214 | NR | PZR07722.1 | 48 | g28489 | i0 | 77.3 | 4.82661290322581 | 22 | 5 | 26.6 | 0 | 242 | 177 | 771 | 792 | PZR07722.1 MAG: hypothetical protein DI536_26815 [Archangium gephyra] | diamond | 1197 | 43.9 | 0.990888382687927 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 27667798 | 27667798 | PRJNA1073183_P_NODE_30424_length_246_cov_0.890173_g30329_i0 | PRJNA1073183 | 30424 | 246 | 0.890173 | 2.18982558 | Myxococcaceae bacterium | 2484252 | Bacteria | Bacteria | 101 | 2.64e-23 | NR | MBX7098050.1 | 2484252 | g30329 | i0 | 64.2 | 0.98780487804878 | 81 | 29 | 98.8 | 0 | 245 | 3 | 157 | 237 | MBX7098050.1 acetyl-CoA C-acetyltransferase [Myxococcaceae bacterium] | diamond | 243 | 101 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcaceae bacterium | |||
| 27762619 | 27762619 | PRJNA1073183_P_NODE_23524_length_269_cov_1.346939_g23429_i0 | PRJNA1073183 | 23524 | 269 | 1.346939 | 3.62326591 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 75.9 | 1.09e-13 | NR | HOO39298.1 | 2026735 | g23429 | i0 | 40.9 | 3.91449814126394 | 88 | 50 | 98.1 | 1 | 1 | 264 | 351 | 436 | HOO39298.1 acetyl-CoA acetyltransferase [Deltaproteobacteria bacterium] | diamond | 1053 | 75.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 28330612 | 28330612 | PRJNA1073183_P_NODE_13146_length_357_cov_1.683099_g13051_i0 | PRJNA1073183 | 13146 | 357 | 1.683099 | 6.00866343 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 80.5 | 8.47e-15 | NR | MBP1730777.1 | 2026735 | g13051 | i0 | 46.8 | 1.05882352941176 | 126 | 56 | 99.2 | 4 | 354 | 1 | 467 | 589 | MBP1730777.1 putative peptidase, domain repeat-containing [Deltaproteobacteria bacterium] | diamond | 378 | 80.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 28804063 | 28804063 | PRJNA1073183_P_NODE_9328_length_419_cov_2.210983_g9234_i0 | PRJNA1073183 | 9328 | 419 | 2.210983 | 9.26401877 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 160 | 1.13e-46 | NR | MBI5468643.1 | 2026735 | g9234 | i0 | 56.9 | 4.90453460620525 | 137 | 58 | 97.4 | 1 | 12 | 419 | 1 | 137 | MBI5468643.1 NAD(P)H:quinone oxidoreductase [Deltaproteobacteria bacterium] | diamond | 2055 | 160 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 28835836 | 28835836 | PRJNA1073183_P_NODE_24428_length_263_cov_1.621053_g24333_i0 | PRJNA1073183 | 24428 | 263 | 1.621053 | 4.26336939 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 59.7 | 1.06e-8 | NR | MCA9657307.1 | 2026763 | g24333 | i0 | 43.6 | 0.627376425855513 | 55 | 31 | 62.7 | 0 | 257 | 93 | 109 | 163 | MCA9657307.1 SET domain-containing protein-lysine N-methyltransferase [Myxococcales bacterium] | diamond | 165 | 59.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 29088557 | 29088557 | PRJNA1073183_P_NODE_27068_length_250_cov_1.361582_g26973_i0 | PRJNA1073183 | 27068 | 250 | 1.361582 | 3.403955 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 94 | 1.22e-20 | NR | MCZ6714053.1 | 2026735 | g26973 | i0 | 48.8 | 2.856 | 80 | 41 | 96 | 0 | 3 | 242 | 145 | 224 | MCZ6714053.1 class I SAM-dependent methyltransferase [Deltaproteobacteria bacterium] | diamond | 714 | 94 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 29269212 | 29269212 | PRJNA1073183_P_NODE_31869_length_244_cov_0.900585_g31774_i0 | PRJNA1073183 | 31869 | 244 | 0.900585 | 2.1974274 | root | 1 | Root_unresolved | Root_unresolved | 110 | 5.53e-26 | NR | WP_045119223.1 | 80816 | g31774 | i0 | 64.2 | 5.96311475409836 | 81 | 29 | 99.6 | 0 | 244 | 2 | 535 | 615 | WP_045119223.1 S9 family peptidase [Haliangium ochraceum] | diamond | 1455 | 111 | 0.990990990990991 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Haliangium | Haliangium ochraceum | |||
| 29395750 | 29395750 | PRJNA1073183_P_NODE_24349_length_264_cov_1.209424_g24254_i0 | PRJNA1073183 | 24349 | 264 | 1.209424 | 3.19287936 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 107 | 2.18e-26 | NR | MDC0056435.1 | 2026735 | g24254 | i0 | 54.5 | 14.875 | 88 | 40 | 100 | 0 | 264 | 1 | 33 | 120 | MDC0056435.1 peptidase dimerization domain-containing protein [Deltaproteobacteria bacterium] | diamond | 3927 | 108 | 0.990740740740741 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 29467017 | 29467017 | PRJNA1073183_P_NODE_31710_length_244_cov_1.350877_g31615_i0 | PRJNA1073183 | 31710 | 244 | 1.350877 | 3.29613988 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 46.6 | 0.00159 | NR | MBM4280126.1 | 2026735 | g31615 | i0 | 48.3 | 0.737704918032787 | 60 | 29 | 71.3 | 1 | 177 | 4 | 199 | 258 | MBM4280126.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 180 | 46.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30027448 | 30027448 | PRJNA1073183_P_NODE_28911_length_248_cov_0.880000_g28816_i0 | PRJNA1073183 | 28911 | 248 | 0.88 | 2.1824 | root | 1 | Root_unresolved | Root_unresolved | 47.4 | 4.49e-4 | NR | MDO8446330.1 | 2026735 | g28816 | i0 | 36.8 | 2.6491935483871 | 68 | 42 | 82.3 | 1 | 216 | 13 | 86 | 152 | MDO8446330.1 GAF domain-containing protein [Deltaproteobacteria bacterium] | diamond | 657 | 47.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30067330 | 30067330 | PRJNA1073183_P_NODE_31172_length_245_cov_0.895349_g31077_i0 | PRJNA1073183 | 31172 | 245 | 0.895349 | 2.19360505 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 159 | 8.17e-45 | NR | MFO0674363.1 | 2268199 | g31077 | i0 | 90.1 | 24.7959183673469 | 81 | 8 | 99.2 | 0 | 244 | 2 | 71 | 151 | MFO0674363.1 NADP-dependent isocitrate dehydrogenase [Polyangiaceae bacterium] | diamond | 6075 | 159 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 30848794 | 30848794 | PRJNA1073183_P_NODE_32334_length_244_cov_0.900585_g32239_i0 | PRJNA1073183 | 32334 | 244 | 0.900585 | 2.1974274 | Bacteria | 2 | Bacteria | Bacteria | 79 | 6.59e-15 | NR | MBW2725789.1 | 2026735 | g32239 | i0 | 52.1 | 2.7172131147541 | 73 | 32 | 87.3 | 2 | 1 | 213 | 244 | 315 | MBW2725789.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 663 | 79 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 32217173 | 32217173 | PRJNA1073183_P_NODE_8818_length_430_cov_1.397759_g8724_i0 | PRJNA1073183 | 8818 | 430 | 1.397759 | 6.0103637 | Corallococcus sp. Z5C1 | 1898750 | Bacteria | Bacteria | 169 | 2.1e-48 | NR | WP_143908615.1 | 2596829 | g8724 | i0 | 52.4 | 7.92558139534884 | 143 | 66 | 99.8 | 1 | 430 | 2 | 216 | 356 | WP_143908615.1 M35 family metallo-endopeptidase [Corallococcus sp. Z5C101001] | diamond | 3408 | 169 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus sp. Z5C101001 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;