RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA1073183" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA1073183 · 11 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5290326 5290326 PRJNA1073183_P_NODE_9445_length_417_cov_1.098837_g9351_i0 PRJNA1073183 9445 417 1.098837 4.58215029 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 181 1.13e-53   NR XP_004356622.1 1257118 g9351 i0 62.3 0.992805755395683 138 52 99.3 0 416 3 51 188 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 414 181 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14216105 14216105 PRJNA1073183_P_NODE_34392_length_241_cov_0.916667_g34297_i0 PRJNA1073183 34392 241 0.916667 2.20916747 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 135 1.64e-36   NR XP_004338705.1 1257118 g34297 i0 77.2 2.95020746887967 79 18 98.3 0 239 3 172 250 XP_004338705.1 serine/threonine kinase [Acanthamoeba castellanii str. Neff] diamond 711 135 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19312878 19312878 PRJNA1073183_P_NODE_21616_length_282_cov_1.196172_g21521_i0 PRJNA1073183 21616 282 1.196172 3.37320504 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 78.2 1.67e-14   NR AAC37215.1 5755 g21521 i0 43.6 2.24468085106383 101 40 95.7 3 272 3 113 207 AAC37215.1 disulfide-like protein [Acanthamoeba castellanii] diamond 633 78.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27027238 27027238 PRJNA1073183_P_NODE_26502_length_251_cov_0.865169_g26407_i0 PRJNA1073183 26502 251 0.865169 2.17157419 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 120 3.1299999999999997e-30   NR XP_004339226.1 1257118 g26407 i0 69.9 13.9243027888446 83 25 99.2 0 1 249 48 130 XP_004339226.1 GDPassociated inhibitor, putative [Acanthamoeba castellanii str. Neff] diamond 3495 121 0.991735537190083 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28520240 28520240 PRJNA1073183_P_NODE_15907_length_327_cov_1.799213_g15812_i0 PRJNA1073183 15907 327 1.799213 5.88342651 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 117 9.72e-32   NR XP_004333362.1 1257118 g15812 i0 54.5 2.79816513761468 101 44 90.8 1 326 30 5 105 XP_004333362.1 ribosomal protein L21e, putative [Acanthamoeba castellanii str. Neff] diamond 915 117 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29183384 29183384 PRJNA1073183_P_NODE_29749_length_247_cov_0.885057_g29654_i0 PRJNA1073183 29749 247 0.885057 2.18609079 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 43.1 0.0291   NR XP_004336477.1 1257118 g29654 i0 37 0.88663967611336 73 42 87.4 2 246 31 318 387 XP_004336477.1 Ser/Thr phosphatase family superfamily protein [Acanthamoeba castellanii str. Neff] diamond 219 43.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29246301 29246301 PRJNA1073183_P_NODE_16989_length_318_cov_1.138776_g16894_i0 PRJNA1073183 16989 318 1.138776 3.62130768 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 123 8.89e-34   NR XP_004339793.1 1257118 g16894 i0 59 0.990566037735849 105 36 98.1 2 316 5 3 101 XP_004339793.1 nuclear transport factor 2, putative [Acanthamoeba castellanii str. Neff] diamond 315 123 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30098841 30098841 PRJNA1073183_P_NODE_13932_length_348_cov_1.116364_g13837_i0 PRJNA1073183 13932 348 1.116364 3.88494672 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 118 8.32e-31   NR XP_004333244.1 1257118 g13837 i0 52 0.879310344827586 102 48 87.1 1 304 2 14 115 XP_004333244.1 MAPEG family protein [Acanthamoeba castellanii str. Neff] diamond 306 118 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30153431 30153431 PRJNA1073183_P_NODE_20932_length_286_cov_1.159624_g20837_i0 PRJNA1073183 20932 286 1.159624 3.31652464 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 87 1.68e-17   NR AGC82269.1 5755 g20837 i0 42.1 1.99300699300699 95 54 99.7 1 286 2 407 500 AGC82269.1 cAMP phosphodiesterase [Acanthamoeba castellanii] diamond 570 87 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31078603 31078603 PRJNA1073183_P_NODE_30035_length_247_cov_0.885057_g29940_i0 PRJNA1073183 30035 247 0.885057 2.18609079 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 101 7.48e-23   NR XP_004334568.1 1257118 g29940 i0 63.4 0.995951417004049 82 27 98.4 2 1 243 860 939 XP_004334568.1 paired amphipathic helix protein sin3, putative [Acanthamoeba castellanii str. Neff] diamond 246 101 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31679146 31679146 PRJNA1073183_P_NODE_22677_length_275_cov_1.247525_g22582_i0 PRJNA1073183 22677 275 1.247525 3.43069375 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 138 4.61e-40   NR XP_004339588.1 1257118 g22582 i0 85.9 4.33090909090909 78 11 85.1 0 41 274 5 82 XP_004339588.1 60S ribosomal protein, putative [Acanthamoeba castellanii str. Neff] diamond 1191 138 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;