RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1073183" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1073183 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5289958 5289958 PRJNA1073183_P_NODE_20265_length_290_cov_1.382488_g20170_i0 PRJNA1073183 20265 290 1.382488 4.0092152 Rozella allomycis CSF55 988480 Fungi Fungi 175 2.39e-53   NR EPZ35492.1 988480 g20170 i0 92.2 0.931034482758621 90 7 93.1 0 21 290 1 90 EPZ35492.1 60S ribosomal protein L15 [Rozella allomycis CSF55] diamond 270 175 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32280596 32280596 PRJNA1073183_P_NODE_21399_length_283_cov_1.466667_g21304_i0 PRJNA1073183 21399 283 1.466667 4.15066761 Rozella allomycis CSF55 988480 Fungi Fungi 63.9 2.1e-9   NR EPZ35743.1 988480 g21304 i0 59.6 0.498233215547703 47 19 49.8 0 143 283 189 235 EPZ35743.1 Chaperonin ClpA/B domain-containing protein [Rozella allomycis CSF55] diamond 141 63.9 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;