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contig_metadata

11 rows where bioproject = "PRJNA1073183" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1073183 · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16764123 16764123 PRJNA1073183_P_NODE_22794_length_274_cov_1.487562_g22699_i0 PRJNA1073183 22794 274 1.487562 4.07591988 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 484 2.0899999999999994e-132   NTclustered gi|76574293|gb|DQ139441.1| 171953 g22699 i0 98.54 137.638686131387 274 4 100 0 1 274 1782 1509 Uncultured Acidobacteria bacterium clone CAL1 23S ribosomal RNA gene, partial sequence blastn 37713 484 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
17593813 17593813 PRJNA1073183_P_NODE_13834_length_349_cov_1.115942_g13739_i0 PRJNA1073183 13834 349 1.115942 3.89463758 Pseudomonadati 3379134 Bacteria Bacteria 135 3.18e-27   NTclustered gi|2874253710|emb|OY969475.1| 2283092 g13739 i0 75.427 24.5730659025788 293 64 82 8 62 348 4925134 4925424 MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 blastn 8576 135 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
26624175 26624175 PRJNA1073183_P_NODE_28021_length_249_cov_0.875000_g27926_i0 PRJNA1073183 28021 249 0.875 2.17875 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 55.8 8.96e-7   NR MBA3356142.1 2283092 g27926 i0 40 1.80722891566265 75 45 90.4 0 247 23 181 255 MBA3356142.1 tetratricopeptide repeat protein [Pyrinomonadaceae bacterium] diamond 450 55.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
26972398 26972398 PRJNA1073183_P_NODE_26142_length_252_cov_1.363128_g26047_i0 PRJNA1073183 26142 252 1.363128 3.43508256 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 82.8 4.15e-17   NR HEX6648633.1 2283092 g26047 i0 50.7 1.72619047619048 75 37 89.3 0 18 242 89 163 HEX6648633.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 435 82.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27130193 27130193 PRJNA1073183_P_NODE_27982_length_249_cov_0.875000_g27887_i0 PRJNA1073183 27982 249 0.875 2.17875 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 48.9 2.58e-4   NR HSL84189.1 2651171 g27887 i0 46.6 0.698795180722892 58 31 69.9 0 71 244 26 83 HSL84189.1 matrixin family metalloprotease [Thermoanaerobaculia bacterium] diamond 174 48.9 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28614909 28614909 PRJNA1073183_P_NODE_16067_length_326_cov_1.177866_g15972_i0 PRJNA1073183 16067 326 1.177866 3.83984316 Acidobacteriota bacterium 1978231 Bacteria Bacteria 107 1.35e-27   NR MDQ7008654.1 1978231 g15972 i0 86.8 0.625766871165644 68 8 62.6 1 2 205 45 111 MDQ7008654.1 hypothetical protein [Acidobacteriota bacterium] diamond 204 107 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28764148 28764148 PRJNA1073183_P_NODE_4227_length_614_cov_2.316081_g4136_i0 PRJNA1073183 4227 614 2.316081 14.22073734 Bacteria 2 Bacteria Bacteria 243 8.66e-78   NR MBS1831214.1 1978231 g4136 i0 61 13.3387622149837 195 72 95.3 1 607 23 42 232 MBS1831214.1 hypothetical protein [Acidobacteriota bacterium] diamond 8190 244 0.995901639344262 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29814580 29814580 PRJNA1073183_P_NODE_28111_length_249_cov_0.875000_g28016_i0 PRJNA1073183 28111 249 0.875 2.17875 Terriglobales bacterium 2282142 Bacteria Bacteria 59.7 3.51e-8   NR HYD46757.1 2282142 g28016 i0 56.8 0.530120481927711 44 19 53 0 2 133 82 125 HYD46757.1 hypothetical protein [Terriglobales bacterium] diamond 132 59.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
30004310 30004310 PRJNA1073183_P_NODE_32151_length_244_cov_0.900585_g32056_i0 PRJNA1073183 32151 244 0.900585 2.1974274 Edaphobacter sp. 1934404 Bacteria Bacteria 42.4 0.0498   NR HSY69586.1 1934404 g32056 i0 37.1 1.09426229508197 89 37 87.3 4 242 30 212 299 HSY69586.1 multicopper oxidase domain-containing protein [Edaphobacter sp.] diamond 267 42.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter sp.
31109878 31109878 PRJNA1073183_P_NODE_23995_length_266_cov_1.595855_g23900_i0 PRJNA1073183 23995 266 1.595855 4.2449743 Acidobacteriota bacterium 1978231 Bacteria Bacteria 72 2.39e-12   NR MCB1044792.1 1978231 g23900 i0 44.8 2.04135338345865 87 44 93.6 3 10 258 344 430 MCB1044792.1 hypothetical protein [Acidobacteriota bacterium] diamond 543 72 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31710913 31710913 PRJNA1073183_P_NODE_19517_length_296_cov_1.067265_g19422_i0 PRJNA1073183 19517 296 1.067265 3.1591044 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 44.3 0.0144   NR HYX28426.1 2283092 g19422 i0 33.3 0.547297297297297 54 34 54.7 1 115 276 154 205 HYX28426.1 saposin domain-containing protein [Pyrinomonadaceae bacterium] diamond 162 44.3 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;