RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA1073183", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1073183 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4013932 4013932 PRJNA1073183_P_NODE_8644_length_434_cov_1.412742_g8550_i0 PRJNA1073183 8644 434 1.412742 6.13130028 Dictyocoela muelleri 279532 Fungi Fungi 94.7 2.36e-21   NR KAG0440815.1 279532 g8550 i0 67.7 2.11520737327189 62 20 42.9 0 1 186 107 168 KAG0440815.1 60S ribosomal protein L11 [Dictyocoela muelleri] diamond 918 94.7 1 Eukaryota Opisthokonta Fungi Microsporidia       Dictyocoela Dictyocoela muelleri
4844143 4844143 PRJNA1073183_P_NODE_28664_length_248_cov_1.320000_g28569_i0 PRJNA1073183 28664 248 1.32 3.2736 Opisthokonta 33154 Fungi Fungi 52.8 0.022   NTclustered gi|149391566|emb|AM422905.1| 723287 g28569 i0 100 0.225806451612903 28 0 11 0 77 104 8691 8664 Brachiola algerae 16S rRNA gene, ITS1 and 23S rRNA gene, strain Undeen blastn 56 52.8 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Anncaliia Anncaliia algerae
28393782 28393782 PRJNA1073183_P_NODE_27846_length_249_cov_1.602273_g27751_i0 PRJNA1073183 27846 249 1.602273 3.98965977 Mitosporidium daphniae 1485682 Fungi Fungi 139 1.62e-39   NR XP_013236758.1 1485682 g27751 i0 84.3 5 83 13 100 0 249 1 66 148 XP_013236758.1 40S ribosomal protein S6 [Mitosporidium daphniae] diamond 1245 139 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
32027285 32027285 PRJNA1073183_P_NODE_23378_length_270_cov_1.401015_g23283_i0 PRJNA1073183 23378 270 1.401015 3.7827405 Trachipleistophora hominis 72359 Fungi Fungi 91.7 1.4e-20   NR ELQ76160.1 72359 g23283 i0 46.7 2.04444444444444 92 46 100 2 1 270 78 168 ELQ76160.1 putative Ras small GTPase [Trachipleistophora hominis] diamond 552 91.7 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Trachipleistophora Trachipleistophora hominis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;