RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1073183", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 7 ✖

tax_kingdom 1

  • Fungi · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1073183 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1462016 1462016 PRJNA1073183_P_NODE_7182_length_475_cov_1.803483_g7088_i0 PRJNA1073183 7182 475 1.803483 8.56654425 Fungi 4751 Fungi Fungi 210 3.03e-66   NR KAI9220356.1 64508 g7088 i0 75.9 7.56 133 32 84 0 475 77 72 204 KAI9220356.1 ribosomal protein L15e [Blastocladiella britannica] diamond 3591 212 0.990566037735849 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
11219475 11219475 PRJNA1073183_P_NODE_15489_length_331_cov_8.321705_g15394_i0 PRJNA1073183 15489 331 8.321705 27.54484355 Fungi 4751 Fungi Fungi 121 3.36e-33   NR KAI9221418.1 64508 g15394 i0 59.8 5.27492447129909 97 39 87.9 0 306 16 14 110 KAI9221418.1 60S ribosomal protein L30 [Blastocladiella britannica] diamond 1746 122 0.991803278688525 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
26805707 26805707 PRJNA1073183_P_NODE_28221_length_249_cov_0.875000_g28126_i0 PRJNA1073183 28221 249 0.875 2.17875 Blastocladiomycota 451459 Fungi Fungi 46.6 0.00157   NR KAI9183309.1 1313167 g28126 i0 38 1.90361445783133 79 47 94 2 12 245 6 83 KAI9183309.1 Mitochondrial porin [Blastocladiella emersonii ATCC 22665] diamond 474 47 0.991489361702128 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
28006715 28006715 PRJNA1073183_P_NODE_17085_length_317_cov_0.946721_g16990_i0 PRJNA1073183 17085 317 0.946721 3.00110557 root 1 Root_unresolved Root_unresolved 102 2.02e-25   NR KAI9138745.1 1500003 g16990 i0 52.3 1.5993690851735 86 39 79.5 2 255 4 34 119 KAI9138745.1 hypothetical protein BKA69DRAFT_748852 [Paraphysoderma sedebokerense] diamond 507 103 0.990291262135922 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
28141482 28141482 PRJNA1073183_P_NODE_24805_length_261_cov_1.473404_g24710_i0 PRJNA1073183 24805 261 1.473404 3.84558444 Catenaria anguillulae PL171 765915 Fungi Fungi 171 1.21e-47   NR ORZ40339.1 765915 g24710 i0 96.5 0.988505747126437 86 3 98.9 0 2 259 248 333 ORZ40339.1 Dolichyl-phosphate-mannose-protein mannosyltransferase-domain-containing protein [Catenaria anguillulae PL171] diamond 258 171 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
29530577 29530577 PRJNA1073183_P_NODE_34890_length_226_cov_2.013072_g34795_i0 PRJNA1073183 34890 226 2.013072 4.54954272 Paraphysoderma sedebokerense 1500003 Fungi Fungi 46.2 0.00182   NR KAI9144769.1 1500003 g34795 i0 37.7 0.809734513274336 61 38 81 0 35 217 143 203 KAI9144769.1 hypothetical protein BKA69DRAFT_1054309 [Paraphysoderma sedebokerense] diamond 183 46.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
32312337 32312337 PRJNA1073183_P_NODE_12099_length_371_cov_2.959732_g12004_i0 PRJNA1073183 12099 371 2.959732 10.98060572 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 134 1.68e-35   NR KNE60599.1 578462 g12004 i0 62 1.61725067385445 100 38 80.9 0 71 370 1 100 KNE60599.1 hypothetical protein AMAG_05979 [Allomyces macrogynus ATCC 38327] diamond 600 134 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;