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contig_metadata

34 rows where bioproject = "PRJNA1073183" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 34 ✖

bioproject 1

  • PRJNA1073183 · 34 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2737635 2737635 PRJNA1073183_P_NODE_1483_length_994_cov_2.811075_g1421_i0 PRJNA1073183 1483 994 2.811075 27.9420855 Chlorophyceae 3166 Plants Plants 347 3.1899999999999998e-115   NR KAJ9532284.1 44745 g1421 i0 64.8 9.75754527162978 253 88 76.4 1 975 217 72 323 KAJ9532284.1 hypothetical protein QJQ45_010414 [Haematococcus lacustris] diamond 9699 347 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
4013607 4013607 PRJNA1073183_P_NODE_20924_length_286_cov_1.258216_g20829_i0 PRJNA1073183 20924 286 1.258216 3.59849776 Monoraphidium neglectum 145388 Plants Plants 228 4.0899999999999984e-55   NTclustered gi|926781757|ref|XM_014043899.1| 145388 g20829 i0 84.649 24.9335664335664 228 35 80 0 2 229 172 399 Monoraphidium neglectum 60S ribosomal protein mRNA blastn 7131 228 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
7393809 7393809 PRJNA1073183_P_NODE_24606_length_262_cov_1.629630_g24511_i0 PRJNA1073183 24606 262 1.62963 4.2696306 Chlorophyta 3041 Plants Plants 102 9.4e-24   NR CAG9466505.1 765719 g24511 i0 60.3 4.43129770992366 78 26 83.6 1 37 255 227 304 CAG9466505.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 1161 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
7839626 7839626 PRJNA1073183_P_NODE_10627_length_393_cov_3.759375_g10533_i0 PRJNA1073183 10627 393 3.759375 14.77434375 Trebouxia sp. C 2796353 Plants Plants 73.6 6.23e-14   NR KAL0042167.1 2905653 g10533 i0 55.7 2.37404580152672 61 26 45.8 1 46 225 5 65 KAL0042167.1 hypothetical protein WJX77_005300 [Trebouxia sp. C0004] diamond 933 73.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0004
9115123 9115123 PRJNA1073183_P_NODE_7408_length_468_cov_2.744304_g7314_i0 PRJNA1073183 7408 468 2.744304 12.84334272 Astrephomene gubernaculifera 47775 Plants Plants 92.8 1.09e-20   NR GFR49314.1 47775 g7314 i0 50.5 2.81410256410256 109 52 69.9 1 434 108 43 149 GFR49314.1 hypothetical protein Agub_g11337, partial [Astrephomene gubernaculifera] diamond 1317 92.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Astrephomenaceae Astrephomene Astrephomene gubernaculifera
11666059 11666059 PRJNA1073183_P_NODE_33430_length_242_cov_0.911243_g33335_i0 PRJNA1073183 33430 242 0.911243 2.20520806 Polytomella sp. Pringsheim 198.80 37502 Plants Plants 124 4.55e-24   NTclustered gi|402244316|emb|FR686759.1| 37502 g33335 i0 80.625 0.661157024793388 160 31 66 0 2 161 1000 1159 Polytomella sp. Pringsheim 198.80 mRNA for 40S ribosomal protein L3 (rpl3 gene) blastn 160 124 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella sp. Pringsheim 198.80
13769460 13769460 PRJNA1073183_P_NODE_5971_length_519_cov_1.565022_g5878_i0 PRJNA1073183 5971 519 1.565022 8.12246418 Chlamydomonas eustigma 1157962 Plants Plants 238 5.2499999999999997e-76   NR GAX80767.1 1157962 g5878 i0 63 1 173 59 100 1 1 519 91 258 GAX80767.1 hypothetical protein CEUSTIGMA_g8202.t1 [Chlamydomonas eustigma] diamond 519 238 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
14216104 14216104 PRJNA1073183_P_NODE_34352_length_241_cov_0.916667_g34257_i0 PRJNA1073183 34352 241 0.916667 2.20916747 Chlorophyta 3041 Plants Plants 102 5.810000000000001e-26   NR CAG9463659.1 765719 g34257 i0 71.6 2.47717842323651 67 19 83.4 0 206 6 4 70 CAG9463659.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 597 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
15043698 15043698 PRJNA1073183_P_NODE_13452_length_354_cov_0.832740_g13357_i0 PRJNA1073183 13452 354 0.83274 2.9478996 Eukaryota 2759 Plants Plants 488 2.1499999999999997e-133   NTclustered gi|969822364|gb|KT950949.1| 3130 g13357 i0 91.954 98.9915254237288 348 28 98 0 7 354 376 29 Bryopsis plumosa actin mRNA, partial cds blastn 35043 492 0.991869918699187 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis plumosa
15489949 15489949 PRJNA1073183_P_NODE_30433_length_246_cov_0.890173_g30338_i0 PRJNA1073183 30433 246 0.890173 2.18982558 Eukaryota 2759 Plants Plants 137 2.73e-35   NR KAL4859175.1 3077 g30338 i0 75.3 15.4146341463415 81 20 98.8 0 3 245 98 178 KAL4859175.1 60S ribosomal protein L15 [Chlorella vulgaris] diamond 3792 137 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
16764355 16764355 PRJNA1073183_P_NODE_3854_length_641_cov_3.297535_g3765_i0 PRJNA1073183 3854 641 3.297535 21.13719935 Auxenochlorella protothecoides 3075 Plants Plants 174 4.649999999999999e-52   NR XP_011398628.1 3075 g3765 i0 69.5 1.17940717628705 131 39 61.3 1 36 428 1 130 XP_011398628.1 40S ribosomal protein S17 [Auxenochlorella protothecoides] diamond 756 174 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
26805703 26805703 PRJNA1073183_P_NODE_18081_length_308_cov_1.174468_g17986_i0 PRJNA1073183 18081 308 1.174468 3.61736144 Eukaryota 2759 Plants Plants 66.2 4.3e-10   NR QZX49690.1 47292 g17986 i0 37.5 2.99025974025974 104 62 98.4 1 304 2 104 207 QZX49690.1 hypothetical protein, partial [Volvox tertius] diamond 921 66.6 0.993993993993994 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox tertius
26846160 26846160 PRJNA1073183_P_NODE_19241_length_298_cov_1.364444_g19146_i0 PRJNA1073183 19241 298 1.364444 4.06604312 Chlamydomonas sp. UWO 241 1653778 Plants Plants 108 1.8099999999999999e-28   NR KAG1662675.1 1653778 g19146 i0 57.1 0.916107382550336 91 38 91.6 1 274 2 4 93 KAG1662675.1 hypothetical protein FOA52_014601 [Chlamydomonas sp. UWO 241] diamond 273 108 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
26846169 26846169 PRJNA1073183_P_NODE_8161_length_446_cov_1.407507_g8067_i0 PRJNA1073183 8161 446 1.407507 6.27748122 [Myrmecia] bisecta 41462 Plants Plants 178 3.41e-49   NR KAK9817796.1 41462 g8067 i0 60.4 2.00448430493274 149 56 99.6 2 1 444 466 612 KAK9817796.1 hypothetical protein WJX72_002302 [[Myrmecia] bisecta] diamond 894 178 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
26995387 26995387 PRJNA1073183_P_NODE_8802_length_430_cov_2.103641_g8708_i0 PRJNA1073183 8802 430 2.103641 9.0456563 Eukaryota 2759 Plants Plants 105 7.29e-26   NR KAI3429597.1 3077 g8708 i0 50.4 8.7 131 64 90.7 1 425 36 3 133 KAI3429597.1 hypothetical protein D9Q98_005683 [Chlorella vulgaris] diamond 3741 105 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
27248572 27248572 PRJNA1073183_P_NODE_4143_length_619_cov_11.472527_g4052_i0 PRJNA1073183 4143 619 11.472527 71.01494213 root 1 Root_unresolved Root_unresolved 279 1.18e-92   NR GAX77325.1 1157962 g4052 i0 67.6 5.93214862681745 204 66 98.9 0 618 7 1 204 GAX77325.1 hypothetical protein CEUSTIGMA_g4771.t1 [Chlamydomonas eustigma] diamond 3672 281 0.99288256227758 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
27415322 27415322 PRJNA1073183_P_NODE_31703_length_244_cov_1.350877_g31608_i0 PRJNA1073183 31703 244 1.350877 3.29613988 Coccomyxa sp. Obi 2315456 Plants Plants 61.6 1.36e-9   NR BDA42369.1 2315456 g31608 i0 50 0.786885245901639 64 32 78.7 0 234 43 83 146 BDA42369.1 40S ribosomal protein S19 [Coccomyxa sp. Obi] diamond 192 61.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
27509895 27509895 PRJNA1073183_P_NODE_28803_length_248_cov_0.880000_g28708_i0 PRJNA1073183 28803 248 0.88 2.1824 Coccomyxa sp. Obi 2315456 Plants Plants 47.8 6.69e-4   NR BDA50844.1 2315456 g28708 i0 39.7 1.69354838709677 63 38 76.2 0 211 23 248 310 BDA50844.1 Sodium/calcium exchanger NCL2 [Coccomyxa sp. Obi] diamond 420 47.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
28015113 28015113 PRJNA1073183_P_NODE_7965_length_451_cov_11.806878_g7871_i0 PRJNA1073183 7965 451 11.806878 53.24901978 Pedinophyceae sp. YPF-7 765719 Plants Plants 102 1.07e-24   NR CAG9460866.1 765719 g7871 i0 46.8 0.937915742793792 141 56 93.8 2 2 424 1 122 CAG9460866.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 423 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
28448728 28448728 PRJNA1073183_P_NODE_31626_length_244_cov_1.801170_g31531_i0 PRJNA1073183 31626 244 1.80117 4.3948548 Eukaryota 2759 Plants Plants 94.4 2.55e-20   NR KAG1677399.1 1653778 g31531 i0 62.3 5.84016393442623 77 29 94.7 0 233 3 701 777 KAG1677399.1 hypothetical protein FOA52_010779 [Chlamydomonas sp. UWO 241] diamond 1425 94.7 0.996832101372756 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
28994041 28994041 PRJNA1073183_P_NODE_28768_length_248_cov_0.880000_g28673_i0 PRJNA1073183 28768 248 0.88 2.1824 Pedinophyceae sp. YPF-7 765719 Plants Plants 45.4 0.0045   NR CAG9464659.1 765719 g28673 i0 37.5 1.25806451612903 56 35 67.7 0 170 3 102 157 CAG9464659.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 312 45.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
29309433 29309433 PRJNA1073183_P_NODE_19989_length_292_cov_1.821918_g19894_i0 PRJNA1073183 19989 292 1.821918 5.32000056 Pedinophyceae sp. YPF-7 765719 Plants Plants 77.4 7.51e-16   NR CAG9460866.1 765719 g19894 i0 52.2 0.924657534246575 90 42 92.5 1 3 272 34 122 CAG9460866.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 270 77.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
29309438 29309438 PRJNA1073183_P_NODE_23029_length_273_cov_0.955000_g22934_i0 PRJNA1073183 23029 273 0.955 2.60715 Chlamydomonas sp. ICE-L 309537 Plants Plants 105 6.54e-24   NR ALM54989.1 309537 g22934 i0 47.3 7.9010989010989 91 48 100 0 273 1 316 406 ALM54989.1 DEAD box RNA helicase CiRH17, partial [Chlamydomonas sp. ICE-L] diamond 2157 105 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. ICE-L
29395749 29395749 PRJNA1073183_P_NODE_19429_length_297_cov_0.852679_g19334_i0 PRJNA1073183 19429 297 0.852679 2.53245663 Eukaryota 2759 Plants Plants 137 1.32e-35   NR XP_001690556.1 3055 g19334 i0 76.7 90.2121212121212 86 20 86.9 0 40 297 54 139 XP_001690556.1 uncharacterized protein CHLRE_10g439100v5 [Chlamydomonas reinhardtii] diamond 26793 138 0.992753623188406 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
30375321 30375321 PRJNA1073183_P_NODE_32032_length_244_cov_0.900585_g31937_i0 PRJNA1073183 32032 244 0.900585 2.1974274 Volvocaceae 3065 Plants Plants 77.4 5.47e-16   NR KXZ42154.1 33097 g31937 i0 48.6 2.58196721311475 70 36 86.1 0 31 240 4 73 KXZ42154.1 hypothetical protein GPECTOR_194g322 [Gonium pectorale] diamond 630 77.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
30478257 30478257 PRJNA1073183_P_NODE_29033_length_248_cov_0.880000_g28938_i0 PRJNA1073183 29033 248 0.88 2.1824 Sanguina aurantia 2578422 Plants Plants 48.9 2.72e-4   NR MEW5303520.1 2578422 g28938 i0 33.8 1.79032258064516 74 48 88.3 1 29 247 51 124 MEW5303520.1 hypothetical protein [Sanguina aurantia] diamond 444 48.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Sanguina Sanguina aurantia
31038672 31038672 PRJNA1073183_P_NODE_26075_length_252_cov_2.486034_g25980_i0 PRJNA1073183 26075 252 2.486034 6.26480568 Eukaryota 2759 Plants Plants 65.9 2.37e-10   NR XP_042921536.1 3055 g25980 i0 44.3 7.40476190476191 79 40 89.3 2 21 245 6 84 XP_042921536.1 uncharacterized protein CHLRE_09g409500v5 [Chlamydomonas reinhardtii] diamond 1866 65.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
31363110 31363110 PRJNA1073183_P_NODE_14376_length_343_cov_1.081481_g14281_i0 PRJNA1073183 14376 343 1.081481 3.70947983 Pedinophyceae sp. YPF-7 765719 Plants Plants 97.4 5.07e-22   NR CAG9461147.1 765719 g14281 i0 59.3 6.03498542274053 86 35 75.2 0 259 2 67 152 CAG9461147.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 2070 97.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
31805750 31805750 PRJNA1073183_P_NODE_27837_length_249_cov_1.704545_g27742_i0 PRJNA1073183 27837 249 1.704545 4.24431705 Scenedesmus sp. PABB 2909984 Plants Plants 77.8 1.85e-14   NR KAF8073233.1 2742167 g27742 i0 45.7 3.72289156626506 81 44 97.6 0 1 243 441 521 KAF8073233.1 ACX4 [Scenedesmus sp. PABB004] diamond 927 77.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
31828712 31828712 PRJNA1073183_P_NODE_10217_length_401_cov_3.225610_g10123_i0 PRJNA1073183 10217 401 3.22561 12.9346961 Chlorella 3071 Plants Plants 137 6.78e-39   NR PRW20803.1 3076 g10123 i0 65.3 4.70573566084788 124 42 92.8 1 373 2 1 123 PRW20803.1 60S ribosomal L35-like [Chlorella sorokiniana] diamond 1887 138 0.992753623188406 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
32090560 32090560 PRJNA1073183_P_NODE_26838_length_251_cov_0.865169_g26743_i0 PRJNA1073183 26838 251 0.865169 2.17157419 Pleodorina starrii 330485 Plants Plants 69.3 1.65e-11   NR GLC39325.1 330485 g26743 i0 42.3 0.932270916334661 78 43 90.8 1 231 4 188 265 GLC39325.1 hypothetical protein PLESTM_000883900 [Pleodorina starrii] diamond 234 69.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Pleodorina Pleodorina starrii
32208635 32208635 PRJNA1073183_P_NODE_20358_length_289_cov_1.865741_g20263_i0 PRJNA1073183 20358 289 1.865741 5.39199149 Picochlorum 249344 Plants Plants 57.4 4.44e-7   NR WPT15258.1 1470871 g20263 i0 35.9 1.61937716262976 78 47 81 1 36 269 459 533 WPT15258.1 V-type proton ATPase subunit C [Picochlorum sp. SENEW3] diamond 468 57.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. SENEW3
32817020 32817020 PRJNA1073183_P_NODE_14040_length_346_cov_1.692308_g13945_i0 PRJNA1073183 14040 346 1.692308 5.85538568 Haematococcus lacustris 44745 Plants Plants 55.8 2.96e-6   NR KAJ9512470.1 44745 g13945 i0 38 3.09537572254335 92 51 78 3 345 76 91 178 KAJ9512470.1 hypothetical protein QJQ45_018762 [Haematococcus lacustris] diamond 1071 55.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
32848491 32848491 PRJNA1073183_P_NODE_23520_length_269_cov_1.397959_g23425_i0 PRJNA1073183 23520 269 1.397959 3.76050971 Bryopsis sp. KO-2 3115439 Plants Plants 64.7 4.15e-10   NR GMH32983.1 3041901 g23425 i0 37.9 0.970260223048327 87 53 95.9 1 2 259 29 115 GMH32983.1 hypothetical protein BSKO_00817 [Bryopsis sp. KO-2023] diamond 261 64.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;