contig_metadata
9 rows where bioproject = "PRJNA1073183", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1016073 | 1016073 | PRJNA1073183_P_NODE_4461_length_599_cov_1.638783_g4369_i0 | PRJNA1073183 | 4461 | 599 | 1.638783 | 9.81631017 | Pirellulaceae bacterium | 2699754 | Bacteria | Bacteria | 229 | 6.420000000000001e-73 | NR | MFK7736369.1 | 2699754 | g4369 | i0 | 62.9 | 2.70951585976628 | 178 | 61 | 87.1 | 3 | 39 | 560 | 21 | 197 | MFK7736369.1 peptidylprolyl isomerase [Pirellulaceae bacterium] | diamond | 1623 | 229 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellulaceae bacterium | ||
| 11665886 | 11665886 | PRJNA1073183_P_NODE_24590_length_262_cov_2.005291_g24495_i0 | PRJNA1073183 | 24590 | 262 | 2.005291 | 5.25386242 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 451 | 2.02e-122 | NTclustered | gi|389547028|gb|JQ401956.1| | 100233 | g24495 | i0 | 97.71 | 98.2328244274809 | 262 | 6 | 100 | 0 | 1 | 262 | 39 | 300 | Uncultured Planctomycetaceae bacterium clone CNY_02197 16S ribosomal RNA gene, partial sequence | blastn | 25737 | 451 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 12941003 | 12941003 | PRJNA1073183_P_NODE_25491_length_256_cov_3.234973_g25396_i0 | PRJNA1073183 | 25491 | 256 | 3.234973 | 8.28153088 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 215 | 2.8e-51 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g25396 | i0 | 85.922 | 113.05078125 | 206 | 23 | 79 | 6 | 9 | 211 | 4317291 | 4317089 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 28941 | 215 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 15489960 | 15489960 | PRJNA1073183_P_NODE_30873_length_245_cov_1.901163_g30778_i0 | PRJNA1073183 | 30873 | 245 | 1.901163 | 4.65784935 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 353 | 5.41e-93 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g30778 | i0 | 92.653 | 194.951020408163 | 245 | 18 | 100 | 0 | 1 | 245 | 2002870 | 2002626 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 47763 | 353 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 17593823 | 17593823 | PRJNA1073183_P_NODE_19314_length_297_cov_1.736607_g19219_i0 | PRJNA1073183 | 19314 | 297 | 1.736607 | 5.15772279 | Singulisphaera | 466152 | Bacteria | Bacteria | 387 | 6.66e-103 | NTclustered | gi|485099129|ref|NR_102524.1| | 466153 | g19219 | i0 | 90.301 | 118.043771043771 | 299 | 24 | 99 | 5 | 2 | 297 | 299 | 3 | Singulisphaera acidiphila strain MOB10 23S ribosomal RNA gene, complete sequence | blastn | 35059 | 387 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Singulisphaera | Singulisphaera acidiphila | |
| 27446861 | 27446861 | PRJNA1073183_P_NODE_13103_length_358_cov_1.080702_g13008_i0 | PRJNA1073183 | 13103 | 358 | 1.080702 | 3.86891316 | Telmatocola sphagniphila | 1123043 | Bacteria | Bacteria | 68.9 | 8.84e-11 | NR | WP_213498649.1 | 1123043 | g13008 | i0 | 28.2 | 2.70670391061453 | 131 | 80 | 98 | 1 | 6 | 356 | 468 | 598 | WP_213498649.1 ATP-dependent zinc metalloprotease FtsH [Telmatocola sphagniphila] | diamond | 969 | 68.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Telmatocola | Telmatocola sphagniphila | |
| 31047157 | 31047157 | PRJNA1073183_P_NODE_29015_length_248_cov_0.880000_g28920_i0 | PRJNA1073183 | 29015 | 248 | 0.88 | 2.1824 | Sedimentisphaerales bacterium | 2813034 | Bacteria | Bacteria | 81.6 | 2.07e-16 | NR | MBN1974499.1 | 2813034 | g28920 | i0 | 64.2 | 0.641129032258065 | 53 | 19 | 64.1 | 0 | 162 | 4 | 8 | 60 | MBN1974499.1 hypothetical protein [Sedimentisphaerales bacterium] | diamond | 159 | 81.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Sedimentisphaerales | Sedimentisphaerales bacterium | |||
| 31164456 | 31164456 | PRJNA1073183_P_NODE_28795_length_248_cov_0.880000_g28700_i0 | PRJNA1073183 | 28795 | 248 | 0.88 | 2.1824 | Bacteria | 2 | Bacteria | Bacteria | 147 | 4.73e-39 | NR | MFN4244329.1 | 2795155 | g28700 | i0 | 82.9 | 9.91935483870968 | 82 | 14 | 99.2 | 0 | 246 | 1 | 1076 | 1157 | MFN4244329.1 methionine synthase [Tepidisphaerales bacterium] | diamond | 2460 | 147 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaerales bacterium | |||
| 32470455 | 32470455 | PRJNA1073183_P_NODE_28439_length_249_cov_0.875000_g28344_i0 | PRJNA1073183 | 28439 | 249 | 0.875 | 2.17875 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 43.9 | 0.00629 | NR | MBL8754923.1 | 2026780 | g28344 | i0 | 42.9 | 0.927710843373494 | 77 | 32 | 83.1 | 4 | 214 | 8 | 14 | 86 | MBL8754923.1 hypothetical protein [Planctomycetota bacterium] | diamond | 231 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;