contig_metadata
21 rows where bioproject = "PRJNA1073183" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1016073 | 1016073 | PRJNA1073183_P_NODE_4461_length_599_cov_1.638783_g4369_i0 | PRJNA1073183 | 4461 | 599 | 1.638783 | 9.81631017 | Pirellulaceae bacterium | 2699754 | Bacteria | Bacteria | 229 | 6.420000000000001e-73 | NR | MFK7736369.1 | 2699754 | g4369 | i0 | 62.9 | 2.70951585976628 | 178 | 61 | 87.1 | 3 | 39 | 560 | 21 | 197 | MFK7736369.1 peptidylprolyl isomerase [Pirellulaceae bacterium] | diamond | 1623 | 229 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellulaceae bacterium | ||
| 4013793 | 4013793 | PRJNA1073183_P_NODE_3184_length_701_cov_1.805732_g3099_i0 | PRJNA1073183 | 3184 | 701 | 1.805732 | 12.65818132 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 348 | 1.29e-117 | NR | RYD65414.1 | 2026800 | g3099 | i0 | 73.9 | 1.00142653352354 | 234 | 58 | 99.7 | 2 | 700 | 2 | 85 | 316 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 702 | 348 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 10390308 | 10390308 | PRJNA1073183_P_NODE_10889_length_389_cov_2.066456_g10794_i0 | PRJNA1073183 | 10889 | 389 | 2.066456 | 8.03851384 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 496 | 1.43e-135 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g10794 | i0 | 91.831 | 155.804627249357 | 355 | 29 | 91 | 0 | 1 | 355 | 27824 | 27470 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 60608 | 496 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 11665886 | 11665886 | PRJNA1073183_P_NODE_24590_length_262_cov_2.005291_g24495_i0 | PRJNA1073183 | 24590 | 262 | 2.005291 | 5.25386242 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 451 | 2.02e-122 | NTclustered | gi|389547028|gb|JQ401956.1| | 100233 | g24495 | i0 | 97.71 | 98.2328244274809 | 262 | 6 | 100 | 0 | 1 | 262 | 39 | 300 | Uncultured Planctomycetaceae bacterium clone CNY_02197 16S ribosomal RNA gene, partial sequence | blastn | 25737 | 451 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 12941003 | 12941003 | PRJNA1073183_P_NODE_25491_length_256_cov_3.234973_g25396_i0 | PRJNA1073183 | 25491 | 256 | 3.234973 | 8.28153088 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 215 | 2.8e-51 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g25396 | i0 | 85.922 | 113.05078125 | 206 | 23 | 79 | 6 | 9 | 211 | 4317291 | 4317089 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 28941 | 215 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 15489960 | 15489960 | PRJNA1073183_P_NODE_30873_length_245_cov_1.901163_g30778_i0 | PRJNA1073183 | 30873 | 245 | 1.901163 | 4.65784935 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 353 | 5.41e-93 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g30778 | i0 | 92.653 | 194.951020408163 | 245 | 18 | 100 | 0 | 1 | 245 | 2002870 | 2002626 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 47763 | 353 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 16764429 | 16764429 | PRJNA1073183_P_NODE_8634_length_434_cov_1.673130_g8540_i0 | PRJNA1073183 | 8634 | 434 | 1.67313 | 7.2613842 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 242 | 8.820000000000001e-80 | NR | MCP5470421.1 | 2047757 | g8540 | i0 | 81.1 | 0.988479262672811 | 143 | 27 | 98.8 | 0 | 6 | 434 | 1 | 143 | MCP5470421.1 hypothetical protein [Chlamydiales bacterium] | diamond | 429 | 242 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 17593823 | 17593823 | PRJNA1073183_P_NODE_19314_length_297_cov_1.736607_g19219_i0 | PRJNA1073183 | 19314 | 297 | 1.736607 | 5.15772279 | Singulisphaera | 466152 | Bacteria | Bacteria | 387 | 6.66e-103 | NTclustered | gi|485099129|ref|NR_102524.1| | 466153 | g19219 | i0 | 90.301 | 118.043771043771 | 299 | 24 | 99 | 5 | 2 | 297 | 299 | 3 | Singulisphaera acidiphila strain MOB10 23S ribosomal RNA gene, complete sequence | blastn | 35059 | 387 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Singulisphaera | Singulisphaera acidiphila | |
| 21864238 | 21864238 | PRJNA1073183_P_NODE_34298_length_241_cov_0.916667_g34203_i0 | PRJNA1073183 | 34298 | 241 | 0.916667 | 2.20916747 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 117 | 1.9000000000000003e-28 | NR | MSU23997.1 | 1913982 | g34203 | i0 | 79.7 | 13.6680497925311 | 79 | 16 | 98.3 | 0 | 3 | 239 | 603 | 681 | MSU23997.1 DUF1592 domain-containing protein [Opitutus sp.] | diamond | 3294 | 117 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. | |
| 26655638 | 26655638 | PRJNA1073183_P_NODE_32101_length_244_cov_0.900585_g32006_i0 | PRJNA1073183 | 32101 | 244 | 0.900585 | 2.1974274 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 140 | 2.07e-40 | NR | MCP5470420.1 | 2047757 | g32006 | i0 | 80.2 | 0.995901639344262 | 81 | 16 | 99.6 | 0 | 1 | 243 | 2 | 82 | MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] | diamond | 243 | 140 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 27446861 | 27446861 | PRJNA1073183_P_NODE_13103_length_358_cov_1.080702_g13008_i0 | PRJNA1073183 | 13103 | 358 | 1.080702 | 3.86891316 | Telmatocola sphagniphila | 1123043 | Bacteria | Bacteria | 68.9 | 8.84e-11 | NR | WP_213498649.1 | 1123043 | g13008 | i0 | 28.2 | 2.70670391061453 | 131 | 80 | 98 | 1 | 6 | 356 | 468 | 598 | WP_213498649.1 ATP-dependent zinc metalloprotease FtsH [Telmatocola sphagniphila] | diamond | 969 | 68.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Telmatocola | Telmatocola sphagniphila | |
| 28235688 | 28235688 | PRJNA1073183_P_NODE_17366_length_314_cov_1.099585_g17271_i0 | PRJNA1073183 | 17366 | 314 | 1.099585 | 3.4526969 | Waddliaceae bacterium | 2026802 | Bacteria | Bacteria | 70.1 | 1.65e-11 | NR | HEY4831209.1 | 2026802 | g17271 | i0 | 45.3 | 1.39490445859873 | 86 | 45 | 80.3 | 1 | 1 | 252 | 267 | 352 | HEY4831209.1 F0F1 ATP synthase subunit alpha [Waddliaceae bacterium] | diamond | 438 | 70.1 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddliaceae bacterium | ||
| 28678152 | 28678152 | PRJNA1073183_P_NODE_2787_length_747_cov_1.158754_g2704_i0 | PRJNA1073183 | 2787 | 747 | 1.158754 | 8.65589238 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 381 | 2.7799999999999993e-126 | NR | RYD77759.1 | 2026800 | g2704 | i0 | 78.4 | 0.983935742971888 | 245 | 53 | 98.4 | 0 | 737 | 3 | 161 | 405 | RYD77759.1 MAG: hypothetical protein EOP84_15150, partial [Verrucomicrobiaceae bacterium] | diamond | 735 | 381 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 28795628 | 28795628 | PRJNA1073183_P_NODE_26847_length_251_cov_0.865169_g26752_i0 | PRJNA1073183 | 26847 | 251 | 0.865169 | 2.17157419 | Bacteria | 2 | Bacteria | Bacteria | 76.6 | 3.47e-14 | NR | MFM1768708.1 | 2026799 | g26752 | i0 | 44.7 | 3.54980079681275 | 76 | 40 | 90.8 | 2 | 16 | 243 | 73 | 146 | MFM1768708.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 891 | 76.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28898843 | 28898843 | PRJNA1073183_P_NODE_12708_length_363_cov_1.327586_g12613_i0 | PRJNA1073183 | 12708 | 363 | 1.327586 | 4.81913718 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 128 | 6.84e-33 | NR | RYD71398.1 | 2026800 | g12613 | i0 | 58.5 | 0.975206611570248 | 118 | 46 | 95 | 3 | 347 | 3 | 233 | 350 | RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] | diamond | 354 | 128 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 29246303 | 29246303 | PRJNA1073183_P_NODE_24209_length_265_cov_1.203125_g24114_i0 | PRJNA1073183 | 24209 | 265 | 1.203125 | 3.18828125 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 43.1 | 0.0352 | NR | HXC01461.1 | 2006848 | g24114 | i0 | 33.7 | 0.973584905660377 | 86 | 44 | 82.6 | 3 | 22 | 240 | 371 | 456 | HXC01461.1 methyltransferase domain-containing protein [Opitutaceae bacterium] | diamond | 258 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 30004298 | 30004298 | PRJNA1073183_P_NODE_10131_length_403_cov_1.830303_g10037_i0 | PRJNA1073183 | 10131 | 403 | 1.830303 | 7.37612109 | Lentisphaerota bacterium | 1932692 | Bacteria | Bacteria | 47 | 0.00695 | NR | NQU40615.1 | 1932692 | g10037 | i0 | 50 | 0.588089330024814 | 46 | 21 | 34.2 | 1 | 1 | 138 | 378 | 421 | NQU40615.1 glycosyltransferase [Lentisphaerota bacterium] | diamond | 237 | 47 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 31047157 | 31047157 | PRJNA1073183_P_NODE_29015_length_248_cov_0.880000_g28920_i0 | PRJNA1073183 | 29015 | 248 | 0.88 | 2.1824 | Sedimentisphaerales bacterium | 2813034 | Bacteria | Bacteria | 81.6 | 2.07e-16 | NR | MBN1974499.1 | 2813034 | g28920 | i0 | 64.2 | 0.641129032258065 | 53 | 19 | 64.1 | 0 | 162 | 4 | 8 | 60 | MBN1974499.1 hypothetical protein [Sedimentisphaerales bacterium] | diamond | 159 | 81.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Sedimentisphaerales | Sedimentisphaerales bacterium | |||
| 31164456 | 31164456 | PRJNA1073183_P_NODE_28795_length_248_cov_0.880000_g28700_i0 | PRJNA1073183 | 28795 | 248 | 0.88 | 2.1824 | Bacteria | 2 | Bacteria | Bacteria | 147 | 4.73e-39 | NR | MFN4244329.1 | 2795155 | g28700 | i0 | 82.9 | 9.91935483870968 | 82 | 14 | 99.2 | 0 | 246 | 1 | 1076 | 1157 | MFN4244329.1 methionine synthase [Tepidisphaerales bacterium] | diamond | 2460 | 147 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaerales bacterium | |||
| 32249085 | 32249085 | PRJNA1073183_P_NODE_26358_length_251_cov_1.297753_g26263_i0 | PRJNA1073183 | 26358 | 251 | 1.297753 | 3.25736003 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 102 | 8.989999999999998e-24 | NR | MBA3815054.1 | 2052176 | g26263 | i0 | 57.8 | 5.00796812749004 | 83 | 34 | 98 | 1 | 250 | 5 | 230 | 312 | MBA3815054.1 RsmB/NOP family class I SAM-dependent RNA methyltransferase [Parachlamydiaceae bacterium] | diamond | 1257 | 102 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 32470455 | 32470455 | PRJNA1073183_P_NODE_28439_length_249_cov_0.875000_g28344_i0 | PRJNA1073183 | 28439 | 249 | 0.875 | 2.17875 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 43.9 | 0.00629 | NR | MBL8754923.1 | 2026780 | g28344 | i0 | 42.9 | 0.927710843373494 | 77 | 32 | 83.1 | 4 | 214 | 8 | 14 | 86 | MBL8754923.1 hypothetical protein [Planctomycetota bacterium] | diamond | 231 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;