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contig_metadata

12 rows where bioproject = "PRJNA1073005" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 12 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA1073005 · 12 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14215661 14215661 PRJNA1073005_P_NODE_7012_length_323_cov_0.924000_g6893_i0 PRJNA1073005 7012 323 0.924 2.98452 archaeon 1906665 Archaea Archaea 105 1.11e-24   NR RYH13701.1 1906665 g6893 i0 57 0.993808049535604 107 46 99.4 0 3 323 207 313 RYH13701.1 MAG: 50S ribosomal protein L4 [archaeon] diamond 321 105 1 Archaea               archaeon
20588059 20588059 PRJNA1073005_P_NODE_9777_length_245_cov_0.895349_g9658_i0 PRJNA1073005 9777 245 0.895349 2.19360505 archaeon 1906665 Archaea Archaea 88.2 1.58e-18   NR RYH13652.1 1906665 g9658 i0 56.6 0.930612244897959 76 30 89.4 1 4 222 21 96 RYH13652.1 MAG: ADP-ribosylglycohydrolase family protein [archaeon] diamond 228 88.2 1 Archaea               archaeon
25242256 25242256 PRJNA1073005_P_NODE_6460_length_349_cov_1.115942_g6341_i0 PRJNA1073005 6460 349 1.115942 3.89463758 archaeon 1906665 Archaea Archaea 204 7.75e-63   NR RYH04926.1 1906665 g6341 i0 87.1 0.997134670487106 116 15 99.7 0 2 349 46 161 RYH04926.1 MAG: 50S ribosomal protein L10, partial [archaeon] diamond 348 204 1 Archaea               archaeon
27193702 27193702 PRJNA1073005_P_NODE_5782_length_381_cov_2.305195_g5663_i0 PRJNA1073005 5782 381 2.305195 8.78279295 archaeon 1906665 Archaea Archaea 160 3.64e-47   NR RYH12636.1 1906665 g5663 i0 61.6 0.984251968503937 125 47 98.4 1 381 7 4 127 RYH12636.1 MAG: glutathione transferase GstA [archaeon] diamond 375 160 1 Archaea               archaeon
27604656 27604656 PRJNA1073005_P_NODE_7224_length_314_cov_2.435685_g7105_i0 PRJNA1073005 7224 314 2.435685 7.6480509 archaeon 1906665 Archaea Archaea 142 2.7299999999999998e-40   NR RYH12636.1 1906665 g7105 i0 65.4 0.993630573248408 104 36 99.4 0 312 1 10 113 RYH12636.1 MAG: glutathione transferase GstA [archaeon] diamond 312 142 1 Archaea               archaeon
28015103 28015103 PRJNA1073005_P_NODE_6225_length_360_cov_1.209059_g6106_i0 PRJNA1073005 6225 360 1.209059 4.3526124 archaeon 1906665 Archaea Archaea 112 7.67e-30   NR RYG67183.1 1906665 g6106 i0 76 0.625 75 18 62.5 0 1 225 3 77 RYG67183.1 MAG: hypothetical protein EON64_08020 [archaeon] diamond 225 112 1 Archaea               archaeon
28551871 28551871 PRJNA1073005_P_NODE_9527_length_247_cov_0.885057_g9408_i0 PRJNA1073005 9527 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 47 0.00117   NR MDP2437063.1 1906665 g9408 i0 50 3.06072874493927 32 16 38.9 0 101 6 2 33 MDP2437063.1 hypothetical protein [archaeon] diamond 756 47 1 Archaea               archaeon
29025643 29025643 PRJNA1073005_P_NODE_7788_length_290_cov_1.175115_g7669_i0 PRJNA1073005 7788 290 1.175115 3.4078335 archaeon 1906665 Archaea Archaea 43.5 0.032   NR RYH26676.1 1906665 g7669 i0 28.1 0.993103448275862 96 69 99.3 0 2 289 51 146 RYH26676.1 MAG: hypothetical protein EON65_14315, partial [archaeon] diamond 288 43.5 1 Archaea               archaeon
31015246 31015246 PRJNA1073005_P_NODE_9415_length_248_cov_0.880000_g9296_i0 PRJNA1073005 9415 248 0.88 2.1824 archaeon 1906665 Archaea Archaea 127 1.42e-34   NR RYH14964.1 1906665 g9296 i0 76.5 3.91935483870968 81 19 98 0 2 244 54 134 RYH14964.1 MAG: glutathione S-transferase family protein [archaeon] diamond 972 127 1 Archaea               archaeon
31552996 31552996 PRJNA1073005_P_NODE_7996_length_283_cov_1.366667_g7877_i0 PRJNA1073005 7996 283 1.366667 3.86766761 archaeon 1906665 Archaea Archaea 68.9 3.52e-11   NR RYG68730.1 1906665 g7877 i0 39.8 0.985865724381625 93 50 96.5 3 275 3 83 171 RYG68730.1 MAG: glycosyltransferase family 61 protein [archaeon] diamond 279 68.9 1 Archaea               archaeon
31774052 31774052 PRJNA1073005_P_NODE_10237_length_242_cov_0.911243_g10118_i0 PRJNA1073005 10237 242 0.911243 2.20520806 archaeon 1906665 Archaea Archaea 95.5 5.72e-23   NR RYG96273.1 1906665 g10118 i0 82.8 0.71900826446281 58 10 71.9 0 174 1 1 58 RYG96273.1 MAG: hypothetical protein EON65_54665 [archaeon] diamond 174 95.5 1 Archaea               archaeon
32817015 32817015 PRJNA1073005_P_NODE_8520_length_265_cov_1.203125_g8401_i0 PRJNA1073005 8520 265 1.203125 3.18828125 Candidatus Micrarchaeaceae archaeon 2953041 Archaea Archaea 43.9 0.00623   NR HVC77501.1 2953041 g8401 i0 39.7 1.4377358490566 63 36 69.1 1 43 225 4 66 HVC77501.1 hypothetical protein [Candidatus Micrarchaeaceae archaeon] diamond 381 43.9 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Micrarchaeales Candidatus Micrarchaeaceae   Candidatus Micrarchaeaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;