RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1073005" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1073005 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14215660 14215660 PRJNA1073005_P_NODE_6992_length_324_cov_1.187251_g6873_i0 PRJNA1073005 6992 324 1.187251 3.84669324 Skokie dicistro-like virus 2789443 Viruses Viruses 560 4.09e-155   NTclustered gi|1935607033|gb|MT747992.1| 2789443 g6873 i0 97.84 1 324 7 100 0 1 324 267 590 Skokie dicistro-like virus strain USAdf-2 polyprotein 1 and polyprotein 2 genes, complete cds blastn 324 560 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
14215667 14215667 PRJNA1073005_P_NODE_8072_length_280_cov_1.487923_g7953_i0 PRJNA1073005 8072 280 1.487923 4.1661844 Skokie dicistro-like virus 2789443 Viruses Viruses 496 9.92e-136   NTclustered gi|1940198090|gb|MT757477.1| 2789443 g7953 i0 98.571 5 280 4 100 0 1 280 979 700 Skokie dicistro-like virus strain CHNdf-3 polyprotein gene, partial cds blastn 1400 496 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
29372654 29372654 PRJNA1073005_P_NODE_7129_length_317_cov_1.577869_g7010_i0 PRJNA1073005 7129 317 1.577869 5.00184473 Shenzhen dicistro-like virus 2789378 Viruses Viruses 54.3 8.14e-6   NR QPN36948.1 2789378 g7010 i0 29.2 1.81703470031546 96 66 90.9 1 293 6 678 771 QPN36948.1 polyprotein [Shenzhen dicistro-like virus] diamond 576 54.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;